LOCUS BC009499 1600 bp mRNA linear HUM 06-APR-2004 DEFINITION Homo sapiens syntaxin binding protein 6 (amisyn), mRNA (cDNA clone MGC:16478 IMAGE:3955370), complete cds. ACCESSION BC009499 VERSION BC009499.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1600) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1600) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (25-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC009499.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 25 Row: k Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21426792. FEATURES Location/Qualifiers source 1..1600 /db_xref="H-InvDB:HIT000034407" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:16478 IMAGE:3955370" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1600 /gene="STXBP6" /gene_synonym="amisyn" /gene_synonym="HSPC156" /db_xref="GeneID:29091" /db_xref="MIM:607958" CDS 343..975 /gene="STXBP6" /gene_synonym="amisyn" /gene_synonym="HSPC156" /codon_start=1 /product="STXBP6 protein" /protein_id="AAH09499.1" /db_xref="GeneID:29091" /db_xref="MIM:607958" /translation="MSAKSAISKEIFAPLDERMLGAVQVKRRTKKKIPFLATGGQGEY LTYICLSVTNKKPTQASITKVKQFEGSTSFVRRSQWMLEQLRQVNGIDPNGDSAEFDL LFENAFDQWVASTASEKCTFFQILHHTCQRYLTDRKPEFINCQSKIMGGNSILHSAAD SVTSAVQKASQALNERGERLGRAEEKTEDLKNSAQQFAETAHKLAMKHKC" misc_feature 820..963 /gene="STXBP6" /gene_synonym="amisyn" /gene_synonym="HSPC156" /note="Synaptobrevin; Region: Synaptobrevin" /db_xref="CDD:pfam00957" BASE COUNT 438 a 342 c 386 g 434 t ORIGIN 1 ctcccttttc gcgcgcggca gcaggagccg gcgcgggagc cgcgagcggc ggcgagccag 61 cacccgggcc ggctaagcct tgtccggagc ccggagcccg gagccccgcg cggggcagcc 121 ccccggggag gagcctcgtg ctctgggacg cgtgccgcgc actggcacgg ctggggcgcg 181 agccaggctg cacgtttcct gtttagaaag ttctgctcct tcataaggac cttgaagtac 241 taggaggaaa ggtgctttgt gtgtggagtt ttccatgaag tgcagtccca actaaaaggc 301 tgcgttaaag attcactgcg tgctgtcctc acttgttcta caatgagtgc caaatctgct 361 atcagcaagg aaatttttgc acctcttgat gaaaggatgc tgggagctgt ccaagtcaag 421 aggaggacaa agaaaaagat tcctttcttg gcaactggag gtcaaggcga atatttaact 481 tatatctgcc tgtcagtgac aaacaagaaa cccacacagg cgtccatcac aaaggtcaaa 541 cagtttgaag gctccacatc atttgttcgg agatcacagt ggatgctcga gcagcttcgc 601 caggttaatg gtatcgatcc taatggggat tcggcagagt ttgatttgtt gtttgaaaat 661 gcttttgacc agtgggtagc cagcacagcg tcagaaaaat gcaccttctt ccagatcctc 721 caccatacct gccagaggta cctcacggac aggaagccag agtttattaa ctgccaatcc 781 aaaattatgg gaggaaacag catcctccat tcagctgctg acagcgtgac cagcgcagtg 841 cagaaggcaa gccaggcctt gaatgagcgt ggagagcgat taggccgagc agaggagaag 901 acagaagacc tgaagaacag cgcccagcag tttgcagaaa ctgcgcacaa gcttgccatg 961 aagcacaaat gttgagaaac tgcctatcct ggtgactctt cttaagagaa actgaagagt 1021 ttgttcagca gtttttacaa gaattcggga cctccgcttg cttctttttt ttccaatatt 1081 tggacactta gagtggtttt tgttttttct tttcagatgt taatgtgaaa gaaagggtgt 1141 tgcattttta catttcccta atgatcttgc taataaatgc tacaatagca tcagcttcat 1201 tttgggtttt tgcctcctcc cactgtgtgt atgtgtgtat atgtatgttt tgaatatgtt 1261 ttctttatta aaaaatattt tttgtagttt gaatatgaaa tttggaccaa atgataaact 1321 gcactgagtc taaactggca acatgtattt ttttctctga tattaagcag gaaggcattt 1381 taatgtggtg acatcagatg ttatttttcc tagatgaaaa taaaagtcaa gcagtgatta 1441 gtttcagtca ctgtcctagc tacacttaat ttgaagatta aaattctaca ttgtggaaaa 1501 caattgaatt tattgggaaa aacagcagtc ttagattttg ctccttgcat agtaatcttt 1561 tgcatgaacc atcaccagcg ttcaaaaaaa aaaaaaaaaa //