LOCUS BC009489 1499 bp mRNA linear HUM 01-FEB-2005
DEFINITION Homo sapiens membrane-associated ring finger (C3HC4) 9, mRNA (cDNA
clone MGC:16377 IMAGE:3936171), complete cds.
ACCESSION BC009489
VERSION BC009489.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1499)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1499)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009489.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: c Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255015.
FEATURES Location/Qualifiers
source 1..1499
/db_xref="H-InvDB:HIT000034401"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16377 IMAGE:3936171"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1499
/gene="MARCH9"
/gene_synonym="MARCH-IX"
/gene_synonym="RNF179"
/db_xref="GeneID:92979"
CDS 251..952
/gene="MARCH9"
/gene_synonym="MARCH-IX"
/gene_synonym="RNF179"
/codon_start=1
/product="MARCH9 protein"
/protein_id="AAH09489.1"
/db_xref="GeneID:92979"
/translation="MVSDKCHILDLIKAQRRQMLILPEGFREGSWSTLLFRATHHLAL
HPFLGLFGALSPTQWQAISLTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPSAKWQR
QDLLFQICYGMYGFMDVVCIGLIIHEGSSVYRIFKRWQAVNHQWKVLNYDKTKDIGGD
AGGGTAGKSGPRNSRTGPTSGATSRPPAAQRMRPLLPQRCGYTILHLLGQLRPPDARS
SSHSGREVVMRVTTV"
BASE COUNT 363 a 412 c 378 g 346 t
ORIGIN
1 tgatgatgat agcaaatatg tagtgttttc tgtgtcaagt tttggtgtgt attaactctt
61 aatcttcaca ataatcttat tagatactat tattatcccc ttttacaaac gaggacactg
121 atgcacaaag atttgaaaac ttacccaagg ttacttagcc agtaagtgat ggagtcaaga
181 tttaggattc aaatctagat gttttggttt cagagcactt gcccaatcct gcctttctaa
241 agtaagacaa atggtgtcag acaagtgcca cattctagat ttaatcaagg cacagagaag
301 acagatgttg atcctgcctg aaggttttag ggaaggttcc tggagcaccc tgctcttcag
361 ggccacccat cacctggccc tccatccctt tctgggactc tttggagccc tttctcccac
421 acagtggcag gccatctccc tgacggtcat cgagaaggtc cagattgctg ccatagttct
481 gggctcgctc ttcctggttg ccagcatctc ctggctcatc tggtcctcac tcagcccttc
541 agccaagtgg caacgacagg atctgctctt tcagatctgc tacggcatgt atggcttcat
601 ggatgtcgtc tgcataggcc tcatcatcca tgaaggctcc tctgtctacc gcatcttcaa
661 gcgctggcag gcagtgaacc atcagtggaa ggtcctaaat tatgacaaga ccaaggacat
721 aggaggagat gcagggggag ggacggcagg gaagtcaggc cccaggaact cacggacggg
781 ccccacctct ggggccacga gccgcccccc agctgcccag cgcatgcggc cgctcttgcc
841 tcagcgctgc ggttatacaa tcttgcacct ccttgggcag ctgcggccac cagatgcccg
901 ttccagctcc cattctggcc gagaggttgt catgagggtc actacagtct gaactggact
961 ccaggagcag ggatcttgag tcaatgcatc agtcagagaa gaactctcat ggctgctgga
1021 ggtaccagct ggacaaggtg tttggggcat gctgcccccg tcaccgagga tctgtgtggg
1081 tagcctcaag ctggagacat tgtctggcct cactgcccac tgggtagaga cacctggatg
1141 acatttcagt acccgctggc agctcctccc actcatccag agacggccgg tgggcaggcg
1201 gggagagcag ctttccttcc ctggagagaa ccgtctttac ctcagctcct agggcctcca
1261 gccccccagc tccaccacgg tgacttggtg aagggggacc aatgccagaa gaaaggggct
1321 gtagacccct attccccacc ccatggccac agggcatctg gcaataagac tagtatacat
1381 tgacctcccg ttccctgcat gagggcgggg agttccccct gctccatccc ccattgcatg
1441 ggggaagggc ataaagaatc atttatatgc aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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