LOCUS BC009462 1383 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens family with sequence similarity 119, member A, mRNA
(cDNA clone IMAGE:3542748), complete cds.
ACCESSION BC009462
VERSION BC009462.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1383)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1383)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: l Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377537
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1383
/db_xref="H-InvDB:HIT000034380"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3542748"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1383
/gene="FAM119A"
/gene_synonym="MGC45373"
/db_xref="GeneID:151194"
/db_xref="HGNC:HGNC:30476"
CDS 300..572
/gene="FAM119A"
/gene_synonym="MGC45373"
/codon_start=1
/product="FAM119A protein"
/protein_id="AAH09462.1"
/db_xref="GeneID:151194"
/db_xref="HGNC:HGNC:30476"
/translation="MALVPYEETTEFGLQKFHKPLATFSFANHTIQIRQDWRHLGVAA
VVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIVAALLGGGI"
BASE COUNT 394 a 300 c 337 g 352 t
ORIGIN
1 gttttcgcag ccagcccggg gcggggaaag cggagcgcgc gctccacgcg ggaccgcctc
61 ccgggccgta agtaccggcg tggcggcgcc tcagcccggc ctgggcgagc cctgggtgct
121 ccgccgggca gctcacggcg ccccgtatgg cctggggatc ctaagaggcc ctgtgacccc
181 cctcgcctgg tctccctctc acccctggag ggttgccgca gctccggggc ccccgggcag
241 gaagggcgca ctggtcgtcc cgggagaggg gtctgagcag agggcggggt gcaggcggaa
301 tggccctcgt gccctatgag gagaccacgg aatttgggtt gcagaaattc cacaagcctc
361 ttgcaacttt ttcctttgca aaccacacga tccagatccg gcaggactgg agacacctgg
421 gagtcgcagc ggtggtttgg gatgcggcca tcgttctttc cacatacctg gagatgggag
481 ctgtggagct caggggccgc tctgccgtgg agctgggtgc tggcacgggg ctggtgggca
541 tagtggctgc cctgctggga ggtggaattt aattctcctc cccttgaata tgggctggac
601 aaagagaaaa atggtagctc aacagtggag acacctggac agcactttaa ccaagtgatc
661 aaagttaata tcgccaatta tgtatgtgct cccggatgtg atgttatgag aaaggcacac
721 tatacctctg tggaattcct ccccaaaacc tattatctca atctatccat agaaaacact
781 ggacaaatgc aaactgaggg atattctaaa agaaaacaga tcactactct tcaaaagtta
841 caaggccatc aaagacaagg aaacaaactt tcacagactg aaggagacta taattaaatg
901 cgatatggta cccaaactgg attatgtaag taaaaaaact ggggaaataa aatgtataat
961 tcagttaatg gtattatacc aatgtacttt tatttttgat aaatgtaccc tggttatgta
1021 atatactaag attagagaaa gctggatgaa gggtatccgg aactctgtat ttttacaact
1081 cctttgtaag tttaaaatta cttaaaaata tattaaaaat gtatatttac ctttgtactg
1141 gtttgagtaa aaaaactgac tttagaatgt taacatttta gatggtgaaa ttagaagtaa
1201 ttcaattttt aggtaatgtt tcttaattta cttataatga acatgtttta cttgtgtaat
1261 aataaattta aaaaacctga tagtaatgta aatactcttt ggtaacctgc ttttgtccga
1321 gaacatcttc ccatcttaat aaaaatacac ctttatttac tcttaaaaaa aaaaaaaaaa
1381 aaa
//