LOCUS BC009441 2031 bp mRNA linear HUM 14-SEP-2006
DEFINITION Homo sapiens non-SMC condensin II complex, subunit H2, mRNA (cDNA
clone MGC:15858 IMAGE:3509636), complete cds.
ACCESSION BC009441
VERSION BC009441.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2031)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2031)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: f Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..2031
/db_xref="H-InvDB:HIT000034367"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15858 IMAGE:3509636"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2031
/gene="NCAPH2"
/gene_synonym="384D8-2"
/gene_synonym="384D8_6"
/gene_synonym="CAP-H2"
/gene_synonym="hCAP-H2"
/gene_synonym="MGC15858"
/gene_synonym="MGC18000"
/gene_synonym="MGC2455"
/gene_synonym="MGC4133"
/gene_synonym="MGC5305"
/gene_synonym="MGC8640"
/db_xref="GeneID:29781"
/db_xref="HGNC:HGNC:25071"
CDS 229..1899
/gene="NCAPH2"
/gene_synonym="384D8-2"
/gene_synonym="384D8_6"
/gene_synonym="CAP-H2"
/gene_synonym="hCAP-H2"
/gene_synonym="MGC15858"
/gene_synonym="MGC18000"
/gene_synonym="MGC2455"
/gene_synonym="MGC4133"
/gene_synonym="MGC5305"
/gene_synonym="MGC8640"
/codon_start=1
/product="non-SMC condensin II complex, subunit H2"
/protein_id="AAH09441.1"
/db_xref="GeneID:29781"
/db_xref="HGNC:HGNC:25071"
/translation="MNFIEAALLIQGSACVYSKKVEYLYSLVYQALDFISGKRRAKQL
SSVQEDRANGVASSGVPQEAENEFLSLDDFPDSRTNVDLKNDQTPSEVLIIPLLPMAL
VAPDEMEKNNNPLYSRQGEVLASRKDFRMNTCVPHPRGAFMLEPEGMSPMEPAGVSPM
PGTQKDTGRTEEQPMEVSVCRSPVPALGFSQEPGPSPEGPMPLGGGEDEDAEEAVELP
EASAPKAALEPKEFRSPQQSAALPRRYMLREREGAPEPASCVKETPDPWQSLDPFDSL
ESKPFKKGRPYSVPPCVEEALGQKRKRKGAAKLQDFHQWYLAAYADHADSRRLRRKGP
SFADMEVLYWTHVKEQLETLRKLQRREVAEQWLRPAEEDHLEDSLEDLGAAADDFLEP
EEYMEPEGADPREAADLDAVPMSLSYEELVRRNVELFIATSQKFVQETELSQRIRDWE
DTVQPLLQEQEQHVPFDIHTYGDQLVSRFPQLNEWCPFAELVAGQPAFEVCRSMLASL
QLANDYTVEITQQPGLEMAVDTMSLRLLTHQRAHKRFQTYAAPSMAQP"
BASE COUNT 443 a 593 c 644 g 351 t
ORIGIN
1 aactagtggc gggctgagga cgccgtaccc ctcggaaggc agccctgcgg tccctttgcc
61 gcccgttccc tcccggacat ggaggacgtg gaggcgcgct tcgcccacct cttgcagccc
121 atccgcgacc tcaccaagaa ctgggaggtg gacgtggcgg cccagctggg cgagtatctg
181 gaggagctgg atcagatctg catttctttt gacgaaggca agaccacaat gaacttcatt
241 gaggcagcgt tgttgatcca gggctctgcc tgcgtctaca gtaagaaggt ggaatacctc
301 tactcactcg tctaccaggc ccttgatttc atctctggaa agaggcgggc caagcagctc
361 tcttcggtgc aggaggacag ggccaatggg gttgccagct ccggggtccc ccaggaggca
421 gagaatgagt tcctgtcgct ggatgacttc cctgactccc ggactaacgt ggatctcaag
481 aatgatcaga cgcccagtga ggtcctcatc atccccctcc tgcccatggc cctggtggcc
541 cctgatgaaa tggagaagaa caacaatccc ctgtacagcc gtcagggtga ggtcctggcc
601 agccggaagg atttcaggat gaacacgtgc gttccccacc ccagaggggc cttcatgttg
661 gagccagagg gcatgtcccc catggaacca gcgggcgttt cccccatgcc agggacccag
721 aaggacaccg ggaggactga ggagcagcca atggaagttt ccgtgtgcag gagccctgtc
781 ccagcactcg gcttctccca ggagccaggc ccctctccag aaggcccgat gcccctgggt
841 gggggcgagg acgaggatgc agaggaggca gtagagcttc ctgaggcctc ggcccccaag
901 gccgctctgg agcccaagga gttcaggagc ccgcagcaga gtgctgccct gcccaggagg
961 tacatgctgc gggagcggga gggggcccca gagcctgcat cctgcgtgaa ggagactcca
1021 gacccctggc agagcctgga cccctttgac tccttggagt ctaagccctt caagaaaggt
1081 aggccttact ctgtgccccc ctgtgtggag gaggctctgg gacagaagcg caagaggaag
1141 ggcgctgcca agctgcagga cttccaccag tggtacctgg ctgcctatgc agaccatgcc
1201 gacagcaggc ggcttcggcg aaagggtccg tcctttgcag acatggaggt cctgtactgg
1261 acacacgtga aggagcagtt ggaaactctc cggaagctgc agaggaggga ggtggctgag
1321 cagtggctgc ggcctgcaga ggaggaccac ctggaggatt ccctggaaga cctgggggca
1381 gcagcagatg actttctaga gcctgaggag tacatggagc ccgagggagc agaccccagg
1441 gaagccgctg accttgacgc agtgccgatg tccctgagct acgaggagct ggttcgaagg
1501 aatgtggagc tcttcatcgc cacctcccag aagtttgtcc aggagacaga gctgagccag
1561 cgcatcaggg actgggagga cacagtgcag cctctgctcc aggagcagga gcagcatgtg
1621 ccctttgaca tccacaccta tggggaccag ctggtctcac ggttccccca gctcaatgag
1681 tggtgtccct ttgcggagct ggtggctggc cagccggcct tcgaggtgtg tcgttccatg
1741 ctggcctccc tgcagctggc caatgactac acagtggaga taacccagca gcccgggctg
1801 gagatggccg tggacaccat gtccctgaga ctgctcacgc accagcgagc gcacaagcgc
1861 ttccagacct acgctgcccc ctccatggcc cagccctgag tggggagcac cgaggcaggg
1921 gtgggggaat gtgtactgag gagccgtgtg tctgctcctg gctggcccgg cctaataaag
1981 cagtgttgcc atctaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//