LOCUS BC009421 1774 bp mRNA linear HUM 28-SEP-2004
DEFINITION Homo sapiens pantothenate kinase 2 (Hallervorden-Spatz syndrome),
mRNA (cDNA clone IMAGE:3528235).
ACCESSION BC009421
VERSION BC009421.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1774)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1774)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (19-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: g Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24430166.
FEATURES Location/Qualifiers
source 1..1774
/db_xref="H-InvDB:HIT000034354"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3528235"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 465 a 362 c 479 g 468 t
ORIGIN
1 aaggaatccg acgctggggg gcttgctcgg gcggcagcga ctgctgctgc ggatgggagc
61 gggccggctc ggcgcgccca tggagcgcca cggcagggct tccgccacct ccgtctcgtc
121 ggctggggag caggcggccg gggaccccga agggcggcgg caggagccac tgcggcgccg
181 ggcgagcagc gcgtcggtgc ccgcggtcgg ggcctcggct gagggcacga ggcgggatcg
241 actgggctct tacagcggcc ccacctcggt ctcccgccag cgcgtcgaaa gcctgaggaa
301 aaagcggccg ctttttccat ggtttggact ggatatcggt ggaactctgg tcaagctggt
361 atattttgaa cccaaagaca tcactgctga agaagaagag gaagaagtgg aaagtcttaa
421 aagcattcgg aagtacctga cctccaatgt ggcttatggg tctacaggca ttcgggacgt
481 gcacctcgag ctgaaggacc tgactctgtg tggacgcaaa gataggtgat cttcagcttt
541 gcaaactgga tgaactagat tgcttgatca aaggaatttt atacattgac tcagtcggat
601 tcaatggacg gtcacagtgc tattactttg aaaaccctgc tgattctgaa aagtgtcaga
661 agttaccatt tgatttgaaa aatccgtatc ctctgcttct ggtgaacatt ggctcagggg
721 ttagcatctt agcagtatat tccaaagata attacaaacg ggtcacaggt actagtcttg
781 gaggaggaac tttttttggt ctctgctgtc ttcttactgg ctgtaccact tttgaagaag
841 ctcttgaaat ggcatctcgt ggagatagca ccaaagtgga taaactagta cgagatattt
901 atggagggga ctatgagagg tttggactgc caggctgggc tgtggcttca agctttggaa
961 acatgatgag caaggagaag cgagaggctg tcagtaaaga ggacctggcc agagcgactt
1021 tgatcaccat caccaacaac attggctcaa tagcaagaat gtgtgccctt aatgaaaaca
1081 ttaaccaggt ggtatttgtt ggaaatttct tgagaattaa tacgatcgcc atgcggcttt
1141 tggcatatgc tttggattat tggtccaagg ggcagttgaa agcacttttt tcggaacacg
1201 agggttattt tggagctgtt ggagcactcc ttgagctgtt gaagatcccg tgatcattac
1261 ctggggaggg gttcctgaaa ccttccacaa tgggatctgt ggactttcat ttttttaaga
1321 gacttactca atttcatgac tgtactacct gaaacaaagt gagaaaggac aggtgtattt
1381 ttctaagtca tcaagataaa tccttaagaa ttcagtctaa attagcaacc aggaaggaaa
1441 aatatattaa aaacaacaaa aaagtggcac atgtccaggc agtgtgagga tttgctgtat
1501 ataagttgcc tgctttgtat ttttgaaatc tctgcatcac tcattggaag tgcttctgaa
1561 gagagctgct ctgtgttcag ttgactggtt ttgtgtcctg tttgaacttg ctgaatgtaa
1621 ggcaggctac tatgcgttat aatctaatca caatttgtca atatggtctt ggcaatcatc
1681 tgtgcattac tctggtttgc attaagcctg tgtgtgaact tactgtaaaa catgttttat
1741 ttcaaggttc tgcaaaaaaa aaaaaaaaaa aaaa
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