LOCUS BC009396 1769 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens MMS19 nucleotide excision repair homolog (S.
cerevisiae), mRNA (cDNA clone IMAGE:4135275), partial cds.
ACCESSION BC009396
VERSION BC009396.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1769)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1769)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC009396.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: l Column: 11.
FEATURES Location/Qualifiers
source 1..1769
/db_xref="H-InvDB:HIT000034335"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4135275"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1769
/gene="MMS19"
/gene_synonym="hMMS19"
/gene_synonym="MET18"
/db_xref="GeneID:64210"
/db_xref="HGNC:HGNC:13824"
CDS <1..1384
/gene="MMS19"
/gene_synonym="hMMS19"
/gene_synonym="MET18"
/codon_start=2
/product="MMS19 protein"
/protein_id="AAH09396.2"
/db_xref="GeneID:64210"
/db_xref="HGNC:HGNC:13824"
/translation="ETLPLLLQHLWQVNRGNMVAQSSDVIAVCQSLRQMAEKCQQDPE
SCWYFHQTAIPCLLALAVQASMPEKEPSVLRKVLLEDEVLAAMVSVIGTATTHLSPEL
AAQSVTHIVPLFLDGNVSFLPENSFPSRFQPFQDGSSGQRRLIALLMAFVCSLPRNVE
IPQLNQLMRELLELSCCHSCPFSSTAAAKCFAGLLNKHPAGQQLDEFLQLAVDKVEAG
LGSGPCRSQAFTLLLWVTKALVLRYHPLSSCLTARLMGLLSDPELGPAAADGFSLLMS
DCTDVLTRAGHAEVRIMFRQRFFTDNVPALVQGFHAAPQDVKPNYLKGLSHVLNRLPK
PVLLPELPTLLSLLLEALSCPDCVVQLSTLSCLQPLLLEAPQVMSLHVDTLVTKFLNL
SSSPSMAVRIAALQCMHALTRLPTPVLLPYKPQVIRALAKPLDDKKRLVRKEAVSARG
EWFLLGSPGS"
BASE COUNT 383 a 492 c 454 g 440 t
ORIGIN
1 ggagacactg cctctgctgc tgcagcatct ctggcaagtg aacagaggga atatggttgc
61 acaatccagt gacgttattg ctgtctgtca gagcctcaga cagatggcag aaaaatgtca
121 gcaggaccct gagagttgct ggtatttcca ccagacagct ataccttgcc tgcttgcctt
181 ggctgtgcag gcctctatgc cagagaagga gccctcagtt ctgagaaaag tactattgga
241 ggatgaggtg ttggctgcca tggtgtctgt cattggcact gctacaaccc acctgagccc
301 tgagttagct gcccagagtg tgacacacat tgtgcccctc ttcttggatg gcaacgtgtc
361 ctttctgcct gaaaacagct tcccgagcag attccagcca ttccaggatg gctcctcagg
421 gcagaggcgg ctgattgcac tgcttatggc ctttgtctgc tccctgcctc gaaatgtgga
481 aatccctcag ctgaaccaac tcatgcggga gcttttggaa ctgagctgct gccacagctg
541 ccccttttct tccaccgctg ctgccaagtg ctttgcagga ctcctcaaca agcaccctgc
601 agggcagcag ctggatgaat tcctacagct agctgtggac aaagtggagg ctggcctggg
661 ctctgggccc tgtcgtagtc aggccttcac tcttcttctc tgggtaacaa aggccctagt
721 gctcagatac catcctctca gctcctgcct tacagcccgg ctcatgggcc tcctgagtga
781 cccagaatta ggtccagcag cagctgatgg cttctctctg ctcatgtctg actgcactga
841 tgtgctgact cgtgctggcc atgccgaagt gcggatcatg ttccgccagc ggttcttcac
901 agataatgtg cctgctttgg tccagggctt ccatgctgct ccccaagatg tgaagccaaa
961 ctacttgaag ggtctttctc atgtacttaa caggctgccc aagcctgtac tcttgccaga
1021 gctgcccacg cttctttcct tgctgctgga ggccctgtcc tgccctgact gtgtggtgca
1081 gctctccacc ctcagctgcc ttcagcctct tctactggaa gcaccccaag tcatgagtct
1141 tcacgtggac accctcgtca ccaagtttct gaacctcagc tctagccctt ccatggctgt
1201 ccggatcgcc gcactgcagt gcatgcatgc tctcactcgc ctgcccaccc ctgtgctgct
1261 gccgtacaaa ccacaggtga ttcgggcctt agccaaaccc ctggatgaca agaagagact
1321 ggtgcgcaag gaagcagtgt cagccagagg ggagtggttt ctgttgggga gccctggcag
1381 ctgagccctc agtcctggcc tagactgttc tgacaatcta acctgggatt actaactgtt
1441 gagccatctt ccccaaagca gggaaaccac tggtctctga ctgcctttcc cacagacaca
1501 gcacaaatgc taggcctctg ttgcatggct gtacaaagaa cataagagtc catatttcta
1561 gtggatttgt aaaataagtg tgtgtgagac acttgcgttt gaagaaagat ctagggtcct
1621 gggtctcttg catttatatg tcagaaaagg ggcgatatgc tgctgagggg tgagtgcata
1681 tgagtgtggc cctgaggacc agggctggca gatgttgtct acctgctgaa gaataaagat
1741 ttcttttggt aaaaaaaaaa aaaaaaaaa
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