LOCUS BC009376 1511 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromobox homolog 8 (Pc class homolog, Drosophila),
mRNA (cDNA clone MGC:15083 IMAGE:4121509), complete cds.
ACCESSION BC009376
VERSION BC009376.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1511)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1511)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009376.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: d Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10190681.
FEATURES Location/Qualifiers
source 1..1511
/db_xref="H-InvDB:HIT000034318"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15083 IMAGE:4121509"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1511
/gene="CBX8"
/gene_synonym="HPC3"
/gene_synonym="PC3"
/gene_synonym="RC1"
/db_xref="GeneID:57332"
/db_xref="HGNC:HGNC:15962"
CDS 72..1241
/gene="CBX8"
/gene_synonym="HPC3"
/gene_synonym="PC3"
/gene_synonym="RC1"
/codon_start=1
/product="chromobox homolog 8 (Pc class homolog,
Drosophila)"
/protein_id="AAH09376.1"
/db_xref="GeneID:57332"
/db_xref="HGNC:HGNC:15962"
/translation="MELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEP
EENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRSDSARGI
RIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRDRDRER
DRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPRKELPDPSQRPLGEP
SAGLGEYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLVQCGVTSPSSAEATGKLA
VDTFPARVIKHRAAFLEAKGQGALDPNGTRVRHGSGPPSSGGGLYRDMGAQGGRPSLI
ARIPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR"
BASE COUNT 363 a 414 c 477 g 257 t
ORIGIN
1 atggtctgtc gtgcgctggc tgctgctttt ctgctcctgg aagcggccaa ggggggaagc
61 ggcgagtcaa catggagctt tcagcggtgg gggagcgggt gttcgcggcc gaagccctcc
121 tgaagcggcg catacggaaa ggacgcatgg aatacctcgt gaaatggaag ggatggtcgc
181 agaagtacag cacatgggaa ccggaggaaa acatcctgga tgctcgcttg ctcgcagcct
241 ttgaggaaag ggaaagagag atggagctct atggccccaa aaagcgtgga cccaagccca
301 aaaccttcct cctcaaagcg caggccaagg caaaggccaa aacttacgag tttcgaagtg
361 actcagccag gggcatccgg atcccctacc ctggccgctc gccccaggac ctggcctcca
421 cttcccgggc ccgggagggc cttcgaaaca tgggtttgtc cccgccagcg agcagcacca
481 gcaccagcag cacctgccgc gcagaggccc ctcgggaccg ggaccgagac cgggataggg
541 accgggagcg ggatcgagaa agggagaggg agcgagagag ggagcgggaa cgtgagaggg
601 aacgagagcg gggtaccagc agagtggatg acaagcccag ctcaccgggg gacagctcga
661 agaagcgagg ccccaagccc cggaaggagc tcccggaccc ctcacagagg cccttaggcg
721 aacccagcgc cggcctcgga gagtacctca agggcaggaa gctggacgac accccttccg
781 gggcaggaaa gtttccagcc ggccacagtg tgatccagct ggcccgaaga caggactcgg
841 acctggtgca gtgtggtgtg accagcccta gctcagctga ggccacgggc aaactggctg
901 tggacacctt cccggccagg gtgataaagc acagggctgc cttcctggag gccaaaggcc
961 agggtgccct agatcccaat ggcacccggg tccgacatgg ctcaggcccc cccagctctg
1021 gggggggcct gtaccgggac atgggggccc aggggggaag gccctccctc atcgccagga
1081 tccctgtggc cagaatcctg ggggacccgg aggaagagtc ctggagcccc tccctgacta
1141 acctggagaa ggtggtggtc acggacgtga cctcaaactt tttgaccgtc accattaagg
1201 aaagtaacac ggaccaaggc ttttttaaag agaaaagatg aatgctgggt gggtgtgtcc
1261 aggaggagag caggggagag agtgagcgtg agcttggcat agtgattttt atttctgggt
1321 gggatgtggc cttttggctg gtcccgtccc tgatgtcacc cccaccccac cagccccttt
1381 catccctcct tcctccccct cagtttttgt tggaaagatt atctctagag ttatattttc
1441 tattagatgt aaatatgtta tttaagaaaa atatctaaat atatatattt caaaaaaaaa
1501 aaaaaaaaaa a
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