LOCUS       BC009368                3326 bp    mRNA    linear   HUM 19-MAR-2007
DEFINITION  Homo sapiens SWI/SNF related, matrix associated, actin dependent
            regulator of chromatin, subfamily d, member 1, mRNA (cDNA clone
            MGC:15280 IMAGE:4110499), complete cds.
ACCESSION   BC009368
VERSION     BC009368.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3326)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3326)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUN-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 19, 2003 this sequence version replaced BC009368.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 26 Row: b Column: 15
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 21264349.
FEATURES             Location/Qualifiers
     source          1..3326
                     /db_xref="H-InvDB:HIT000034314"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:15280 IMAGE:4110499"
                     /tissue_type="Muscle, rhabdomyosarcoma"
                     /clone_lib="NIH_MGC_17"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..3326
                     /gene="SMARCD1"
                     /gene_synonym="BAF60A"
                     /gene_synonym="CRACD1"
                     /gene_synonym="Rsc6p"
                     /db_xref="GeneID:6602"
                     /db_xref="HGNC:HGNC:11106"
                     /db_xref="MIM:601735"
     CDS             238..1668
                     /gene="SMARCD1"
                     /gene_synonym="BAF60A"
                     /gene_synonym="CRACD1"
                     /gene_synonym="Rsc6p"
                     /codon_start=1
                     /product="SWI/SNF related, matrix associated, actin
                     dependent regulator of chromatin, subfamily d, member 1"
                     /protein_id="AAH09368.3"
                     /db_xref="GeneID:6602"
                     /db_xref="HGNC:HGNC:11106"
                     /db_xref="MIM:601735"
                     /translation="MGPAPGQGLYRSPMPGAAYPRPGMLPGSRMTPQGPSMGPPGYGG
                     NPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRNHNAKKKKMADKILPQRIRELV
                     PESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAED
                     GEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVE
                     WHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVI
                     IQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIII
                     NHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETI
                     NQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQE
                     AVCRYFYSKVQQRRQELEQALGIRNT"
BASE COUNT          744 a          952 c          841 g          789 t
ORIGIN      
        1 ctgagcctcc cgtgccggcc ggccggccgg gggaacaggc gggcgctcgg ggggcgctcg
       61 gggggcgggg ggagttccgg ttccggttct ttgtgcggct gcatcggcgg ctccgggaag
      121 atggcggccc gggcgggttt ccagtctgtg gctccaagcg gcggcgccgg agcctcagga
      181 ggggcgggcg cggctgctgc cttgggcccg ggcggaactc cggggcctcc tgtgcgaatg
      241 ggcccggctc cgggtcaagg gctgtaccgc tccccgatgc ccggagcggc ctatccgaga
      301 ccaggtatgt tgccaggcag ccgaatgaca cctcagggac cttccatggg accccctggc
      361 tatgggggga acccttcagt ccgacctggc ctggcccagt cagggatgga tcagtcccgc
      421 aagagacctg cccctcagca gatccagcag gtccagcagc aggcggtcca aaatcgaaac
      481 cacaatgcaa agaaaaagaa gatggctgac aaaattctac ctcaaaggat tcgtgaactg
      541 gtaccagaat cccaggccta tatggatctc ttggcttttg aaaggaaact ggaccagact
      601 atcatgagga aacggctaga tatccaagag gccttgaaac gtcccatcaa gcaaaaacgg
      661 aagctgcgaa ttttcatttc taacactttc aatccggcta agtcagatgc cgaggatggg
      721 gaagggacgg tggcttcctg ggagcttcgg gtagaaggac ggctcctgga ggattcagcc
      781 ttgtccaaat atgatgccac taaacaaaag aggaagttct cttccttttt taagtccttg
      841 gtgattgaac tggacaaaga cctgtatggg ccagacaacc atctggtaga atggcacagg
      901 accgccacta cccaggagac cgatggcttt caggtgaagc ggccgggaga cgtgaatgta
      961 cggtgtactg tcctactgat gctggattac cagcctcccc agtttaaatt agacccccgc
     1021 ctagctcgac tcctgggcat ccatacccag actcgtccag tgatcatcca agcactgtgg
     1081 caatatatta agacacataa gctccaggac cctcacgagc gggagtttgt catctgtgac
     1141 aagtacctgc agcagatctt tgagtctcaa cgtatgaagt tttcagagat ccctcagcgg
     1201 ctccatgcct tgcttatgcc accagaacct atcatcatta atcatgtcat cagtgttgac
     1261 ccgaatgatc agaaaaagac agcttgttat gacattgatg ttgaagtgga tgacaccttg
     1321 aagacccaga tgaattcttt tctgctgtcc actgccagcc aacaggagat tgctactcta
     1381 gacaacaaga tccatgagac aatagaaacc atcaaccagc tgaagactca gcgggagttc
     1441 atgctgagct ttgccagaga ccctcagggt ttcatcaatg actggcttca gtcccagtgc
     1501 agggacctca agacaatgac tgatgtggtg ggtaacccag aggaggagcg ccgagctgag
     1561 ttctacttcc agccctgggc tcaggaggct gtgtgccgat acttctactc caaggtgcag
     1621 cagagacgac aagaattaga gcaagccctg ggaatccgga atacataggg cctctcccac
     1681 agccctgatt cgactgcacc aattcttgat ttgggccctg tgctgcctgc ctcatagtat
     1741 ctgccttggt cttgcttggg gcgttccagg ggatgctgtt ggttcaagga caacaccaga
     1801 atgaagaggg tctcacaaga cacctgttat cctcttcttt caccctatct cttcccaccc
     1861 ccagcttccc tttgccccac aaagttccca tgtgcctgta ccctcccctg gtctacatag
     1921 gacctctaga tagtgttaga gagagaacat gtagtggtaa tgagtgcttg gaatggattg
     1981 ggcctcaggc caggtggtct tcaaggggac cagctaactg atcctgccct tcagagaccc
     2041 aggagttggg agctttcgct ccttctccaa gactcaggcc tgtgggcact ctataagcta
     2101 gttgatcttg gctctcctga taacagaatc caatttcctt ccttccctcc acaggtttgg
     2161 aacaaactct cccttcactt gttgccctgt agcactacag aaaccctggt tcttgggctc
     2221 cactgagccc caggtcagtc cccagccctc tgggttggcc tgctgtcagt gcttctctca
     2281 ctccttagtt ggggtccaca tcagtattgg agttttgttc tttattgctc cctcccagac
     2341 actccctgtg gctgcccttt gtgattccct cagatctgcc ctaatcccgg gcatttgggt
     2401 gggggaatct tgcctttccc tttcagagcc ccagggatct catctgggga actgtcattg
     2461 ccagcagagg ctgttccttc ctgctgtttg gagatgtgac tcattcattc actcactcca
     2521 ccctgcctct gcatccctta atggagaaac gggcctaaaa ccaaacgggt aaaaagccct
     2581 gggccatccc tgtcttcctg tcccttgtct gcccagttga cacctactgg tgacttctag
     2641 ggcactgagg agtgaaagcg cctagggctg gagaatagcg ctgagttggg tttgtgactc
     2701 ttccctctcc ctgcctcaca ggattgtgac tccccagccc ctgccctcaa agcttcagac
     2761 ccctcaggta gcagcaggac cttgtgatct tggccccttg gatctgagat ggtttttgca
     2821 tctttccagg agagcctcac attcttcttc caggttgtat cacccccgag ttagcatatc
     2881 ccaggctcgc agactcaaca cagcaagggt gggagacagc tgggcacaaa gggggaattc
     2941 cgttcagcat gggctctaaa cccacagaac tgacaaagcc cctgcttccc caccccctcc
     3001 tcaggctcct gcgagcacac ccccaccccc aaatccctcc ctgttctaca ctggggacag
     3061 cagaattttc tccccgtctt ccccttcctg ccattttccc tcccttgaaa ggttgacact
     3121 ggacaacctt ggggcagctg agccctggcc gcctcctggc tggaaccatg agaaggaagc
     3181 tcagtacttc ccacagtgtc cctgttgata actgttttta ttaactgaat tgtttttttc
     3241 atggaccaaa cttttttttg tactgtcccc ttattgatgt tacccagttt taataaaaga
     3301 atcttctgaa aaaaaaaaaa aaaaaa
//