LOCUS BC009365 1084 bp mRNA linear HUM 21-OCT-2003 DEFINITION Homo sapiens zinc finger protein 331, mRNA (cDNA clone IMAGE:4303306), partial cds. ACCESSION BC009365 VERSION BC009365.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1084) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1084) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC009365.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 26 Row: o Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20127571. FEATURES Location/Qualifiers source 1..1084 /db_xref="H-InvDB:HIT000087263" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4303306" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_46" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..>1084 /gene="ZNF331" /gene_synonym="RITA" /gene_synonym="ZNF361" /db_xref="GeneID:55422" /db_xref="MIM:606043" CDS 160..>1084 /gene="ZNF331" /gene_synonym="RITA" /gene_synonym="ZNF361" /codon_start=1 /product="ZNF331 protein" /protein_id="AAH09365.1" /db_xref="GeneID:55422" /db_xref="MIM:606043" /translation="MAQGLVTFADVAIDFSQEEWACLNSAQRDLYWDVMLENYSNLVS LDLESAYENKSLPTEKNIHEIRASKRNSDRRSKSLGRNWICEGTLERPQRSRGRYVNQ MIINYVKRPATREGTPPRTHQRHHKENSFECKDCGKAFSRGYQLSQHQKIHTGEKPYE CKECKKAFRWGNQLTQHQKIHTGEKPYECKDCGKAFRWGSSLVIHKRIHTGEKPYECK DCGKAFRRGDELTQHQRFHTGEKDYECKDCGKTFSRVYKLIQHKRIHSGEKPYECKDC GKAFICGSSLIQHKRIHTGEKPYECQECGKAF" misc_feature 175..297 /gene="ZNF331" /gene_synonym="RITA" /gene_synonym="ZNF361" /note="KRAB; Region: KRAB box. The KRAB domain (or Kruppel-associated box) is present in about a third of zinc finger proteins containing C2H2 fingers. The KRAB domain is found to be involved in protein-protein interactions. The KRAB domain is generally encoded by two exons. The regions coded by the two exons are known as KRAB-A and KRAB-B" /db_xref="CDD:pfam01352" BASE COUNT 344 a 213 c 269 g 258 t ORIGIN 1 gttaaacatc tgaaagggtc aggccagcat ccttcagaaa aagcatcccc gaggaggaag 61 acgaatcgtt aaacatctta ggtcagctct agcctctcgg aatttgtctt cttcagtgga 121 aaccccgaga agactgatca gttcttcagt tctaaaacaa tggcccaggg tttggtgacg 181 ttcgccgacg tagccataga cttttctcag gaggagtggg cctgtctgaa ctctgctcag 241 agggacctgt actgggacgt gatgctggag aactacagta acttggtctc actggatttg 301 gagtcagcat atgaaaataa gagtttacct acagaaaaaa acattcatga aataagggct 361 tccaaaagga attcagatag aagaagtaaa tcccttggcc gtaactggat atgtgaaggt 421 acgcttgaaa gaccacagcg ctccagaggg aggtatgtca atcagatgat catcaattat 481 gtcaaaagac ctgctactag agaaggcacc cctcctagaa cacatcagag acatcataag 541 gagaattcct ttgaatgtaa ggactgtggg aaggccttta gtcgtggcta tcaacttagt 601 caacatcaga aaatccatac tggtgagaaa ccttatgaat gtaaagaatg taagaaggcc 661 ttccgttggg gcaatcagct tactcaacat caaaaaattc atactgggga gaagccctac 721 gaatgtaaag actgtgggaa ggcttttcga tggggctcaa gcctcgttat tcataagagg 781 attcatactg gtgaaaaacc ctatgaatgt aaagactgtg gaaaggcctt tcggcgtggt 841 gatgagctca ctcagcacca gagattccac actggggaga aagactacga atgcaaagac 901 tgtgggaaga cctttagccg tgtgtataaa cttattcagc acaagagaat tcatagtggg 961 gagaagcctt acgagtgtaa agactgtggg aaggctttta tttgtggttc aagcctcatt 1021 cagcataaaa gaattcacac aggtgagaaa ccctatgaat gtcaagaatg tgggaaggcc 1081 ttta //