LOCUS BC009309 1884 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens GABA(A) receptor-associated protein like 1, mRNA (cDNA clone MGC:16572 IMAGE:4100219), complete cds. ACCESSION BC009309 VERSION BC009309.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1884) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1884) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC009309.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 26 Row: a Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 56676368. FEATURES Location/Qualifiers source 1..1884 /db_xref="H-InvDB:HIT000034272" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:16572 IMAGE:4100219" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1884 /gene="GABARAPL1" /gene_synonym="APG8L" /gene_synonym="ATG8" /gene_synonym="GEC1" /db_xref="GeneID:23710" /db_xref="HGNC:HGNC:4068" /db_xref="MIM:607420" CDS 238..591 /gene="GABARAPL1" /gene_synonym="APG8L" /gene_synonym="ATG8" /gene_synonym="GEC1" /codon_start=1 /product="GABA(A) receptor-associated protein like 1" /protein_id="AAH09309.1" /db_xref="GeneID:23710" /db_xref="HGNC:HGNC:4068" /db_xref="MIM:607420" /translation="MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDL DKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEED YFLYVAYSDESVYGK" BASE COUNT 484 a 425 c 487 g 488 t ORIGIN 1 ctctagcgaa aagccgccgg tatttctcca tctggctctc ctctacctcc aggcaggctc 61 acccgagatc cccgccccga accccccctg cacactcggc ccagcgctgt tgcccccgga 121 gcggacgttt ctgcagctat tctgagcaca ccttgacgtc ggctgaggga gcgggacagg 181 gtcagcggcg aaggaggcag gccccgcgcg gggatctcgg aagccctgcg gtgcatcatg 241 aagttccagt acaaggagga ccatcccttt gagtatcgga aaaaggaagg agaaaagatc 301 cggaagaaat atccggacag ggtccccgtg attgtagaga aggctccaaa agccagggtg 361 cctgatctgg acaagaggaa gtacctagtg ccctctgacc ttactgttgg ccagttctac 421 ttcttaatcc ggaagagaat ccacctgaga cctgaggacg ccttattctt ctttgtcaac 481 aacaccatcc ctcccaccag tgctaccatg ggccaactgt atgaggacaa tcatgaggaa 541 gactattttc tgtatgtggc ctacagtgat gagagtgtct atgggaaatg agtggttgga 601 agcccagcag atgggagcac ctggacttgg gggtagggga ggggtgtgtg tgcgcgacat 661 ggggaaagag ggtggctccc accgcaagga gacagaaggt gaagacatct agaaacatta 721 caccacacac accgtcatca cattttcaca tgctcaattg atattttttg ctgcttcctc 781 ggcccaggga gaaagcatgt caggacagag ctgttggatt ggctttgata gaggaatggg 841 gatgatgtaa gtttacagta ttcctggggt ttaattgttg tgcagtttca tagatgggtc 901 aggaggtgga caagttgggg ccagagatga tggcagtcca gcagcaactc cctgtgctcc 961 cttctctttg ggcagagatt ctatttttga catttgcaca agacaggtag ggaaagggga 1021 cttgtggtag tggaccatac ctggggacca aaagagaccc actgtaattg atgcattgtg 1081 gcccctgatc ttccctgtct cacacttctt ttctcccatc ccggttgcaa tctcactcag 1141 acatcacagt accaccccag gggtggcagt agacaacaac ccagaaattt agacagggat 1201 ctcttacctt tggaaaatag gggttaggca tgaaggtggt tgtgattaag aagatggttt 1261 tgttattaaa tagcattaaa ctggaattga caagagtgtt gagcatccct gtctaacctg 1321 ctctttctct ttggtgcccc ttatctcacc ccttccttgg aatttaataa gtctcaggca 1381 tttccaattg tagactaaaa ccactcttag catctcctct agtattttcc atgtatcagg 1441 aaagaggtgt cttatgtagg gagggggcaa gtatgaagta aggtaattat atactactct 1501 cattcaggat tcttgctccc atgctgctgt cccttcaggc tcacatgcac aggaatgcta 1561 catgatggcc agctgcttcc ctccttggtt atcatccact gcagctgcta gttagaaagg 1621 tttggaggga tgacttttag taaatcatgg ggattttatt gatttatttt cacttttggg 1681 attttgtggg gtgggagtgg ggagcaggaa ttgcactcag acatgacatt tcaattcatc 1741 tctgctaatg aaaagggttc tttctcttgg gggaaatgtg tgtgtcagtt ctgtcagctg 1801 caagttcttg tataatgaag tcaatgccat caggccaagg aaataaaata attgcttacc 1861 ttaaaaaaaa aaaaaaaaaa aaaa //