LOCUS BC009306 1722 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens NOP58 ribonucleoprotein homolog (yeast), mRNA (cDNA
clone IMAGE:4301008), partial cds.
ACCESSION BC009306
VERSION BC009306.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1722)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1722)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009306.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: o Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222329.
FEATURES Location/Qualifiers
source 1..1722
/db_xref="H-InvDB:HIT000087248"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4301008"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1722
/gene="NOP58"
/gene_synonym="HSPC120"
/gene_synonym="NOP5"
/gene_synonym="NOP5/NOP58"
/db_xref="GeneID:51602"
/db_xref="HGNC:HGNC:29926"
CDS 157..>1722
/gene="NOP58"
/gene_synonym="HSPC120"
/gene_synonym="NOP5"
/gene_synonym="NOP5/NOP58"
/codon_start=1
/product="NOP58 protein"
/protein_id="AAH09306.1"
/db_xref="GeneID:51602"
/db_xref="HGNC:HGNC:29926"
/translation="MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKL
KHFEKFQDTAEALAAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKL
NLSCIHSPVVNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDT
MIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYA
SAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQ
NRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRD
TPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLE
ARLRTLEDRGIRKISGTGKALAKTEKYEHKSEVKTYDPSGDSTLPTCSKKRKIEQVDK
EDEITEKKAKKAKIKVKVEEEEEEKVAEEEETSVKKKKKRGKKKHIKEEPLSEEEPCT
STAIASPEKKKKKK"
BASE COUNT 590 a 302 c 413 g 417 t
ORIGIN
1 gtttaggcag cgtgttctga ttctttgcgg gacggcgagc gcatttgtgc tttgcccgcc
61 gcggcctagg aggccttttg aggccgcgta gtcggtgttt ttgaactgac tctacagctt
121 ctggcaggcc gtgcggcgcc ctgacccggc ctcaccatgt tggtgctgtt tgaaacgtct
181 gtgggttacg ccatctttaa ggttctaaat gagaagaaac ttcaagaggt tgatagttta
241 tggaaagaat ttgaaactcc agagaaagca aacaaaatag taaagttaaa acattttgag
301 aaatttcagg atacagcaga agcattagca gcattcacag ctctgatgga gggcaaaatc
361 aataagcagc tgaaaaaagt tctgaagaaa atagtaaaag aagcccatga accgctggca
421 gtagctgatg ctaaactagg aggggtcata aaggaaaagc tgaatctcag ttgtatccat
481 agtcctgttg ttaatgaact tatgagagga attcgttcac aaatggatgg attaatccct
541 ggggtagaac cacgtgaaat ggcagctatg tgtcttggat tggctcacag cctgtctcga
601 tatagattga agtttagcgc tgataaagta gacacaatga ttgttcaggc aatttccttg
661 ttagatgact tggataaaga actaaacaac tacattatgc gatgtagaga atggtatggc
721 tggcatttcc ctgaattagg aaaaattatt tcagataatt taacatactg caagtgttta
781 cagaaagttg gcgataggaa gaactatgcc tctgccaagc tttctgagtt gctgccagaa
841 gaagttgaag cagaagtgaa agcagctgca gagatatcaa tgggaacaga ggtttcagaa
901 gaagatattt gcaatattct gcatctttgc acccaggtga ttgaaatctc tgaatatcga
961 acccagctct atgaatatct acaaaatcga atgatggcca ttgcacccaa tgttacagtc
1021 atggttgggg aattagttgg agcacggctt attgctcatg caggttctct tttaaatttg
1081 gccaagcatg cagcttctac cgttcagatt cttggagctg aaaaggcact tttcagagcc
1141 ctcaaatcta gacgggatac ccctaagtat ggtctcattt atcatgcttc actcgtgggc
1201 cagacaagtc ccaaacacaa aggaaagatt tctcgaatgc tggcagccaa aaccgttttg
1261 gctatccgtt atgatgcttt tggtgaggat tcaagttctg caatgggagt tgagaacaga
1321 gccaaattag aggccaggtt gagaactttg gaagacagag ggataagaaa aataagtgga
1381 acaggaaaag cattagcaaa aacagaaaaa tatgaacaca aaagtgaagt gaagacttac
1441 gatccttctg gtgactccac acttccaacc tgttctaaaa aacgcaaaat agaacaggta
1501 gataaagagg atgaaattac tgaaaagaaa gccaaaaaag ccaagattaa agttaaagtt
1561 gaagaagagg aagaagaaaa agtggcagaa gaagaagaaa catctgtgaa gaagaagaag
1621 aaaaggggta aaaagaaaca cattaaggaa gaaccacttt ctgaggaaga accatgtacc
1681 agcacagcaa ttgctagtcc agagaaaaaa aaaaaaaaaa aa
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