LOCUS BC009301 943 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:16688
IMAGE:4126622), complete cds.
ACCESSION BC009301
VERSION BC009301.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 943)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 943)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009301.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: g Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538474.
FEATURES Location/Qualifiers
source 1..943
/db_xref="H-InvDB:HIT000034268"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16688 IMAGE:4126622"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..943
/gene="UBB"
/gene_synonym="MGC8385"
/db_xref="GeneID:7314"
/db_xref="HGNC:HGNC:12463"
/db_xref="MIM:191339"
CDS 85..774
/gene="UBB"
/gene_synonym="MGC8385"
/codon_start=1
/product="ubiquitin B"
/protein_id="AAH09301.1"
/db_xref="GeneID:7314"
/db_xref="HGNC:HGNC:12463"
/db_xref="MIM:191339"
/translation="MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV
KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST
LHLVLRLRGGC"
BASE COUNT 265 a 239 c 240 g 199 t
ORIGIN
1 ctttgttggg tgagcttgtt tgtgtccctg tgggtggacg tggttggtga ttggcaggat
61 cctggtatcc gctaacaggt caaaatgcag atcttcgtga aaacccttac cggcaagacc
121 atcacccttg aggtggagcc cagtgacacc atcgaaaatg tgaaggccaa gatccaggat
181 aaggaaggca ttccccccga ccagcagagg ctcatctttg caggcaagca gctggaagat
241 ggccgtactc tttctgacta caacatccag aaggagtcga ccctgcacct ggtcctgcgt
301 ctgagaggtg gtatgcagat cttcgtgaag accctgaccg gcaagaccat caccctggaa
361 gtggagccca gtgacaccat cgaaaatgtg aaggccaaga tccaggataa agaaggcatc
421 cctcccgacc agcagaggct catctttgca ggcaagcagc tggaagatgg ccgcactctt
481 tctgactaca acatccagaa ggagtcgacc ctgcacctgg tcctgcgtct gagaggtggt
541 atgcagatct tcgtgaagac cctgaccggc aagaccatca ctctggaggt ggagcccagt
601 gacaccatcg aaaatgtgaa ggccaagatc caagataaag aaggcatccc ccccgaccag
661 cagaggctca tctttgcagg caagcagctg gaagatggcc gcactctttc tgactacaac
721 atccagaaag agtcgaccct gcacctggtc ctgcgcctga ggggtggctg ttaattcttc
781 agtcatggca ttcgcagtgc ccagtgatgg cattactctg cactatagcc atttgcccca
841 acttaagttt agaaattaca agtttcagta atagctgaac ctgttcaaaa tgttaataaa
901 ggtttcgttg catggtaaaa aaaaaaaaaa aaaaaaaaaa aaa
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