LOCUS BC009298 1345 bp mRNA linear HUM 16-SEP-2003 DEFINITION Homo sapiens hedgehog interacting protein, mRNA (cDNA clone IMAGE:4123868), partial cds. ACCESSION BC009298 VERSION BC009298.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1345) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1345) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC009298.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 26 Row: e Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1345 /db_xref="H-InvDB:HIT000087245" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4123868" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..>1345 /gene="HHIP" /gene_synonym="FLJ20992" /gene_synonym="HIP" /db_xref="GeneID:64399" /db_xref="MIM:606178" CDS 478..>1345 /gene="HHIP" /gene_synonym="FLJ20992" /gene_synonym="HIP" /codon_start=1 /product="HHIP protein" /protein_id="AAH09298.1" /db_xref="GeneID:64399" /db_xref="MIM:606178" /translation="MLKMLSFKLLLLAVALGFFEGDAKFGERNEGSGARRRRCLNGNP PKRLKRRDRRMMSQLELLSGGEMLCGGFYPRLSCCLRSDSPGLGRLENKIFSVTNNTE CGKLLEEIKCALCSPHSQSLFHSPEREVLERDLVLPLLCKDYCKEFFYTCRGHIPGFL QTTADEFCFYYARKDGGLCFPDFPRKQVRGPASNYLDQMEEYDKVEEISRKHKHNCFC IQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGI KVGFLNFKKKKKK" BASE COUNT 324 a 370 c 326 g 325 t ORIGIN 1 ctcagcatca tctagagccc agcgctggcc ctgcctccgc ctgccccgcc gccgccgtcg 61 ccgtttctgt tcctgctact gtcccaccta aacaactccc gttacacgga caagtgaaca 121 tctgtggctg tcctctcctt ttcttcctcc tcttccaact ccttctcctc ctcccacttc 181 ccagccgcag cagaaagccc ccaacccaac tgacactggc acaactgcaa acggtgtcat 241 ccgcacaact ttatctcgct cctcgggctc ccctaaggca ttggacccat cgccgcgtct 301 tttatttttt gcaaagttgc atcgctgtac atatttttgt ccccgccacc tccctctgtc 361 tctggagtgc cctacagccc cgcaaactcc tcctggagct gcgccctagt gcccctgctg 421 ggcagtggcg ttccccccca tcctcccgcg cccagcccct gctgctctgg gcagacgatg 481 ctgaagatgc tctcctttaa gctgctgctg ctggccgtgg ctctgggctt ctttgaagga 541 gatgctaagt ttggggaaag aaacgaaggg agcggagcaa ggaggagaag gtgcctgaat 601 gggaaccccc cgaagcgcct gaaaaggaga gacaggagga tgatgtccca gctggagctg 661 ctgagtgggg gagagatgct gtgcggtggc ttctaccctc ggctgtcctg ctgcctgcgg 721 agtgacagcc cggggctagg gcgcctggag aataagatat tttctgttac caacaacaca 781 gaatgtggga agttactgga ggaaatcaaa tgtgcacttt gctctccaca ttctcaaagc 841 ctgttccact cacctgagag agaagtcttg gaaagagacc tagtacttcc tctgctctgc 901 aaagactatt gcaaagaatt cttttacact tgccgaggcc atattccagg tttccttcaa 961 acaactgcgg atgagttttg cttttactat gcaagaaaag atggtgggtt gtgctttcca 1021 gattttccaa gaaaacaagt cagaggacca gcatctaact acttggacca gatggaagaa 1081 tatgacaaag tggaagagat cagcagaaag cacaaacaca actgcttctg tattcaggag 1141 gttgtgagtg ggctgcggca gcccgttggt gccctgcata gtggggatgg ctcgcaacgt 1201 ctcttcattc tggaaaaaga aggttatgtg aagatactta cccctgaagg agaaattttc 1261 aaggagcctt atttggacat tcacaaactt gttcaaagtg gaataaaggt tggcttttta 1321 aattttaaaa aaaaaaaaaa aaaaa //