LOCUS BC009290 1113 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 16kDa, V0 subunit
c, mRNA (cDNA clone MGC:16615 IMAGE:4111426), complete cds.
ACCESSION BC009290
VERSION BC009290.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1113)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1113)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009290.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: c Column: 5.
FEATURES Location/Qualifiers
source 1..1113
/db_xref="H-InvDB:HIT000034259"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16615 IMAGE:4111426"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1113
/gene="ATP6V0C"
/gene_synonym="VATL"
/gene_synonym="Vma3"
/db_xref="GeneID:527"
/db_xref="HGNC:HGNC:855"
/db_xref="MIM:108745"
CDS 140..607
/gene="ATP6V0C"
/gene_synonym="VATL"
/gene_synonym="Vma3"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal 16kDa, V0
subunit c"
/protein_id="AAH09290.1"
/db_xref="GeneID:527"
/db_xref="HGNC:HGNC:855"
/db_xref="MIM:108745"
/translation="MSESKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAM
SVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIANSLNDDISLYKSFLQLGAGLSVGLS
GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK"
BASE COUNT 200 a 389 c 291 g 233 t
ORIGIN
1 ggtatttaga gcgcagcggc tgacgggccg gatcgccttc gccgccgccc gcccgcaaac
61 cttcgtgccc ggcccgtcct cgcccccgcc tccgccaccg cctcggcccg cagagcttgc
121 cccctcccca cccgcagaca tgtccgagtc caagagcggc cccgagtatg cttcgttttt
181 cgccgtcatg ggcgcctcgg ccgccatggt cttcagcgcc ctgggcgctg cctatggcac
241 agccaagagc ggtaccggca ttgcggccat gtctgtcatg cggccggagc agatcatgaa
301 gtccatcatc ccagtggtca tggctggcat catcgccatc tacggcctgg tggtggcagt
361 cctcatcgcc aactccctga atgacgacat cagcctctac aagagcttcc tccagctggg
421 cgccggcctg agcgtgggcc tgagcggcct ggcagccggc tttgccatcg gcatcgtggg
481 ggacgctggc gtgcggggca ccgcccagca gccccgacta ttcgtgggca tgatcctgat
541 tctcatcttc gccgaggtgc tcggcctcta cggtctcatc gtcgccctca tcctctccac
601 aaagtagacc ctctccgagc ccaccagcca cagaatatta tgtaaagacc acccctcctc
661 attccagaac gaacagcctg acacatacgc acggggccgc cgcccccagt agttggtctt
721 gtacatgcgc agtgtcctag tgcccatcgt ctgtttcccc ggccttgccc ccgcccgccc
781 cgtgccgtgg acatctgggc ccactcatcg cccctccagg cccccggcgc cccaccccct
841 agagtgctct gtgtatgcgg atgatttaga attgtcattt ctctttactg gatgtttatt
901 tataaagatc tggcctgttc ctgcgtctgc ggagcggccc ttgtctccca gctatctata
961 accttagcta gagtgtcgcc ttgtgggttc ctgttgctga gacttcctgg atggagccgc
1021 cctcaccgcc gggcccgtgg ccctgcgcgg agctgtgtcc aataaagttc ttggatgtga
1081 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//