LOCUS BC009288 2790 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens nuclear receptor subfamily 4, group A, member 2, mRNA (cDNA clone MGC:14354 IMAGE:4298967), complete cds. ACCESSION BC009288 VERSION BC009288.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2790) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2790) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC009288.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 20 Row: l Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27894352. FEATURES Location/Qualifiers source 1..2790 /db_xref="H-InvDB:HIT000034257" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:14354 IMAGE:4298967" /tissue_type="Skin, melanotic melanoma, high MDR." /clone_lib="NIH_MGC_49" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2790 /gene="NR4A2" /gene_synonym="HZF-3" /gene_synonym="NOT" /gene_synonym="RNR1" /gene_synonym="TINUR" /db_xref="GeneID:4929" /db_xref="HGNC:HGNC:7981" /db_xref="MIM:601828" CDS 353..2149 /gene="NR4A2" /gene_synonym="HZF-3" /gene_synonym="NOT" /gene_synonym="RNR1" /gene_synonym="TINUR" /codon_start=1 /product="nuclear receptor subfamily 4, group A, member 2" /protein_id="AAH09288.1" /db_xref="GeneID:4929" /db_xref="HGNC:HGNC:7981" /db_xref="MIM:601828" /translation="MPCVQAQYGSSPQGASPASQSYSYHSSGEYSSDFLTPEFVKFSM DLTNTEITATTSLPSFSTFMDNYSTGYDVKPPCLYQMPLSGQQSSIKVEDIQMHNYQQ HSHLPPQSEEMMPHSGSVYYKPSSPPTPTTPGFQVQHSPMWDDPGSLHNFHQNYVATT HMIEQRKTPVSRLSLFSFKQSPPGTPVSSCQMRFDGPLHVPMNPEPAGSHHVVDGQTF AVPNPIRKPASMGFPGLQIGHASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYG VRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVR TDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISALVRAHVDSNPAMTSLDYSRFQANPD YQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLR LAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSSNLQNMNIDISAFSCIAA LAMVTERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYLSKLLGKLPELRTLC TQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF" BASE COUNT 702 a 813 c 648 g 627 t ORIGIN 1 ggcacattgg cggccagggc cagtccgccc ggcggctcgc gcacggctcc gcggtccctt 61 ttgcctgtcc agccggccgc ctgtccctgc tccctccctc cgtgaggtgt ccgggttccc 121 ttcgcccagc tctcccaccc ctacccgacc ccggcgcccg ggctcccaga gggaactgca 181 cttcggcaga gttgaatgaa tgaagagaga cgcggagaac tcctaaggag gagattggac 241 aggctggact ccccattgct tttctaaaaa tcttggaaac tttgtccttc attgaattac 301 gacactgtcc acctttaatt tcctcgaaaa cgcctgtaac tcggctgaag ccatgccttg 361 tgttcaggcg cagtatgggt cctcgcctca aggagccagc cccgcttctc agagctacag 421 ttaccactct tcgggagaat acagctccga tttcttaact ccagagtttg tcaagtttag 481 catggacctc accaacactg aaatcactgc caccacttct ctccccagct tcagtacctt 541 tatggacaac tacagcacag gctacgacgt caagccacct tgcttgtacc aaatgcccct 601 gtccggacag cagtcctcca ttaaggtaga agacattcag atgcacaact accagcaaca 661 cagccacctg cccccccagt ctgaggagat gatgccgcac tccgggtcgg tttactacaa 721 gccctcctcg cccccgacgc ccaccacccc gggcttccag gtgcagcaca gccccatgtg 781 ggacgacccg ggatctctcc acaacttcca ccagaactac gtggccacta cgcacatgat 841 cgagcagagg aaaacgccag tctcccgcct ctccctcttc tcctttaagc aatcgccccc 901 tggcaccccg gtgtctagtt gccagatgcg cttcgacggg cccctgcacg tccccatgaa 961 cccggagccc gccggcagcc accacgtggt ggacgggcag accttcgctg tgcccaaccc 1021 cattcgcaag cccgcgtcca tgggcttccc gggcctgcag atcggccacg cgtctcagct 1081 gctcgacacg caggtgccct caccgccgtc gcggggctcc ccctccaacg aggggctgtg 1141 cgctgtgtgt ggggacaacg cggcctgcca acactacggc gtgcgcacct gtgagggctg 1201 caaaggcttc tttaagcgca cagtgcaaaa aaatgcaaaa tacgtgtgtt tagcaaataa 1261 aaactgccca gtggacaagc gtcgccggaa tcgctgtcag tactgccgat ttcagaagtg 1321 cctggctgtt gggatggtca aagaagtggt tcgcacagac agtttaaaag gccggagagg 1381 tcgtttgccc tcgaaaccga agagcccaca ggagccctct cccccttcgc ccccggtgag 1441 tctgatcagt gccctcgtca gggcccatgt cgactccaac ccggctatga ccagcctgga 1501 ctattccagg ttccaggcga accctgacta tcaaatgagt ggagatgaca cccagcatat 1561 ccagcaattc tatgatctcc tgactggctc catggagatc atccggggct gggcagagaa 1621 gatccctggc ttcgcagacc tgcccaaagc cgaccaagac ctgctttttg aatcagcttt 1681 cttagaactg tttgtccttc gattagcata caggtccaac ccagtggagg gtaaactcat 1741 cttttgcaat ggggtggtct tgcacaggtt gcaatgcgtt cgtggctttg gggaatggat 1801 tgattccatt gttgaattct cctccaactt gcagaatatg aacatcgaca tttctgcctt 1861 ctcctgcatt gctgccctgg ctatggtcac agagagacac gggctcaagg aacccaagag 1921 agtggaagaa ctgcaaaaca agattgtaaa ttgtctcaaa gaccacgtga ctttcaacaa 1981 tggggggttg aaccgcccca attatttgtc caaactgttg gggaagctcc cagaacttcg 2041 taccctttgc acacaggggc tacagcgcat tttctacctg aaattggaag acttggtgcc 2101 accgccagca ataattgaca aacttttcct ggacacttta cctttctaag acctcctccc 2161 aagcacttca aaggaactgg aatgataatg gaaactgtca agagggggca agtcacatgg 2221 gcagagatag ccgtgtgagc agtctcagct caagctgccc cccatttctg taaccctcct 2281 agcccccttg atccctaaag aaaacaaaca aacaaacaaa aactgttgct atttcctaac 2341 ctgcaggcag aacctgaaag ggcattttgg ctccggggca tcctggattt agaacatgga 2401 ctacacacaa tacagtggta taaacttttt attctcagtt taaaaatcag tttgttgttc 2461 agaagaaaga ttgctataag gtataatggg aaatgtttgg ccatgcttgg ttgttgcagt 2521 tcagacaaat gtaacacaca cacacataca cacacacaca cacacagaga cacatcttaa 2581 ggggacccac aagtattgcc ctttaacaag acttcaaagt tttctgctgt aaagaaagct 2641 gtaatatata gtaaaactaa atgttgcgtg ggtggcatga gttgaagaag gcaaaggctt 2701 gtaaatttac ccaatgcagt ttggcttttt aaattatttt gtgcctattt atgaataaat 2761 attacaaatt ctaaaaaaaa aaaaaaaaaa //