LOCUS BC009273 2413 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens GM2 ganglioside activator, mRNA (cDNA clone MGC:10462 IMAGE:4053681), complete cds. ACCESSION BC009273 VERSION BC009273.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2413) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2413) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Nov 6, 2003 this sequence version replaced BC009273.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 15 Row: j Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39995108. FEATURES Location/Qualifiers source 1..2413 /db_xref="H-InvDB:HIT000034247" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10462 IMAGE:4053681" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_46" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2413 /gene="GM2A" /gene_synonym="SAP-3" /db_xref="GeneID:2760" /db_xref="HGNC:HGNC:4367" /db_xref="MIM:272750" CDS 30..611 /gene="GM2A" /gene_synonym="SAP-3" /codon_start=1 /product="GM2 ganglioside activator" /protein_id="AAH09273.1" /db_xref="GeneID:2760" /db_xref="HGNC:HGNC:4367" /db_xref="MIM:272750" /translation="MQSLMQAPLLIALGLLLAAPAQAHLKKPSQLSSFSWDNCDEGKD PAVIRSLTLEPDPIVVPGNVTLSVVGSTSVPLSSPLKVDLVLEKEVAGLWIKIPCTDY IGSCTFEHFCDVLDMLIPTGEPCPEPLRTYGLPCHCPFKEGTYSLPKSEFVVPDLELP SWLTTGNYRIESVLSSSGKRLGCIKIAASLKGI" BASE COUNT 572 a 619 c 574 g 648 t ORIGIN 1 gttaactccg ccctgaccca cccttcccga tgcagtccct gatgcaggct cccctcctga 61 tcgccctggg cttgcttctc gcggcccctg cgcaagccca cctgaaaaag ccatcccagc 121 tcagtagctt ttcctgggat aactgtgatg aagggaagga ccctgcggtg atcagaagcc 181 tgactctgga gcctgacccc atcgtcgttc ctggaaatgt gaccctcagt gtcgtgggca 241 gcaccagtgt ccccctgagt tctcctctga aggtggattt agttttggag aaggaggtgg 301 ctggcctctg gatcaagatc ccatgcacag actacattgg cagctgtacc tttgaacact 361 tctgtgatgt gcttgacatg ttaattccta ctggggagcc ctgcccagag cccctgcgta 421 cctatgggct tccttgccac tgtcccttca aagaaggaac ctactcactg cccaagagcg 481 aattcgttgt gcctgacctg gagctgccca gttggctcac caccgggaac taccgcatag 541 agagcgtcct gagcagcagt gggaagcgtc tgggctgcat caagatcgct gcctctctaa 601 agggcatata gcatggcatc tgccacagca gaatggagcg gtgtgaggaa ggtccctttt 661 cctctgtttt gtgtttgcca aggccaaact cccactctct gccccccttt aatccccttt 721 ctacagtgag tccactaccc tcactgaaaa tcattttgta ccacttacat tttaggctgg 781 ggcaagcagc cctgacctaa gggagaatga gttggacagt tcttgatagc ccagggcatc 841 tgctgggctg accacgttac tcatccccgt taacattctc tctaaagagc ctcgttcatt 901 tccaaagcag ttaaggaatg ggaaccagag tgttttagga cctgaagaat ctttatgact 961 ctctctcttt cactcttttt ttttttgtca ctaagttaaa agcgaagtga gagtattaac 1021 gtttttgttc tcctccggcc ccctgttaca atgaaggggc aaaagtattt gctcttagtc 1081 tattcctccc ttaacttctg tgactaattt ttatttcctt tctagatttg cccaattaat 1141 actagggtgc agtgtatcct ggagaggtag ggtgtgtggg ggaggaatcc cttgggggag 1201 atattaggag tgctctgttg tttacaaact caggtacccg cagggcctag caagagactt 1261 aaatgactga taagaaccgt gagaaacatg ttgcttccag gcttgatttc gatttttcgc 1321 tttttttttt tgggacggag tctcgctttg tcaccaggct ggagtgcagt ggtgcaatct 1381 cacctcactg caacctccgc ctcctgggtt caagcaattc tcctgcctca gcctcccaag 1441 tagcttggac tacaggccct gccaccacgc ccggctaatt tgtgtatttt tagtagagat 1501 ggggtttcac catgttggcc aggatggtct cgatctcttg acctcgtgat ccgtccacct 1561 tggccttgca aagcgctgga ttacaggcat gagccactac acccagccga tttttccttt 1621 ttgattaaag atgctattac aatgtaaata tttcttacac agaaagtcac agcacatgtg 1681 cccattgata caaggctgct gaggcctggt ctccagttgg aaatataatt aagggtggca 1741 gggactggag tcagttggag agtgcatagc cagtctgtga agacaactgc cagatactgg 1801 caatactcca gcctggtgac agagtgagac tctgtctcaa aaaaaaagtt tcaatgttta 1861 ctcctagaga agccaaaaat ccagatttgt atatgaaatc ttaccatttt aaaagattgg 1921 cagctaatta tttttttaaa aagctgtgca gtgtgatgtg tcccaaacgg actggctcat 1981 gggtggccac gtcacaacct ctgatctcag accgtgcatg ccttgtcctc ttaagacaac 2041 tcctgtggca ccgtttctcc ctccacaggg ccaaagccat agtgtccggt cccaaggaca 2101 aggctcttcc agtgctagga gaggtatgag cagcctctca cctgtgagct gtggggatca 2161 caaggctgcc tgcctcagtc ttggagtcct gttgggtgaa tgaggcagat gggaaagagc 2221 ctcaccagca gctgcttttg gagcaggggt ccaaggaaga gagggtggcc tcgacatcaa 2281 actgcctgga tttttctacc accctgttac atcataacaa cttctgaaac acacaccagc 2341 cctgagttct gggctcattt gaagcctgga atagcaataa atctttttaa cttgcaaaaa 2401 aaaaaaaaaa aaa //