LOCUS BC009258 1890 bp mRNA linear HTC 24-FEB-2004
DEFINITION Homo sapiens Hermansky-Pudlak syndrome 6, mRNA (cDNA clone
IMAGE:3939754), with apparent retained intron.
ACCESSION BC009258
VERSION BC009258.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1890)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1890)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC009258.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: e Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22095382
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1890
/db_xref="H-InvDB:HIT000034236"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3939754"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 376 a 545 c 583 g 386 t
ORIGIN
1 cccacggctt ggtctctcct acagtaagag tctgaatcct ggacgagggg acacatggga
61 cttccggacc ctgctccgag gccttcctgg gttgctgtcc cccagggagc cactggctgt
121 acacacctgg gccccaactc cccagggcct gctgttgctt gacttcgggg gcactgtgag
181 cctattgcag tcccacggtg gtacgcgggc tgtgggcacc ctgcaggagg cacctgtagg
241 cccgtggggg tctgcagccc taggcacatt tcagggcact ctggcctgtg tgctgggctc
301 cacattggaa ctgctggaca tgggcagtgg gcagctgctg gagaggaagg tcctaagtac
361 agacagggta catctgctag aaccgccagc ccccggcatg gaggatgagg aagagctgga
421 gacccgaggg aatcttcgtc tgctttcagc cttgggtctg ttttgtgtgg gctgggaagc
481 cccacagggt gttgagttgc cttcagccaa ggatctggtg tttgaggagg cctgcgggta
541 ctaccagcgg cggagcctgc ggggtgccca gctcactcca gaagaactga gacacagcag
601 cacattccgg gcacctcagg ctctggcctc catcctccag ggccacctgc ccccatctgc
661 actgctgacc atgttgagga ccgagcttcg ggattaccga ggcttagaac agctgaaggc
721 ccagctggtg gctggggatg atgaggaggc tggttggact gagctggcgg agcaggaagt
781 ggcacgcctg ctgaggactg agttgatagg agaccagcta gcccagctca acaccgtttt
841 ccaagccctt cctacagcag cctggggtgc caccctcagg gccctgcagc tccagctaga
901 tgggaatggc aagctgaggt cccaagcacc ccctgatgtg tggaagaaag tgttaggggg
961 aataaccgct ggaaaggaac cccccaatgg aatactgccc ccctttgaac tcctgtgcca
1021 gtgtctgtgc cagctggagc ctcgatggct gccacccttt gtggagctgg cacagcagca
1081 gggcgggccg ggctgggggg cagggggccc aggactgccc ctgtatcgcc gagctctggc
1141 agtgctaggt gaggagggga ccaggcctga ggctctggag ctagagctgc tcttgagcag
1201 tgggcggcct aaagctgtgc tccaagctgt cgggcagctg gtgcaaaagg aacaatggga
1261 tcgggctctg gatgctggcc tggccctcgg cccctccagt cccctgcttc gaagtgaaat
1321 cttcaaactg ctgctggccg agtttgccca gcaccgccgg cttgatgctc acctccccct
1381 cctttgccgc ctgtgcccac cagaactggc tccagctgag ctcctgcttc tactgaggac
1441 atacctccca gatgaggtgg ggcccccaac cccattccct gagcctggag cagagccccc
1501 tctcactgtg ggcttgctca aagccctgct ggagcagact ggggctcaag gatggctgtc
1561 gggcccagtt ctaagcccat atgaggacat cctatgggac cccagcactc cacccccgac
1621 tccacctcgg gacctatgac tacccttcag gcatcagaac actcagggcc tggaggcttg
1681 cttgggactg gaggcttgct tggacagttc ctctgtgtca ctgacacagg aaatcatttc
1741 taggacacag tgatcaggga agggtgcctg ggacttggag ggtcccatgt atggacctgt
1801 gtatgcaata ctgttctgtc atctggagct atttttaaga tgtgtgtgtt aaatatatac
1861 atagtttaat ataaaaaaaa aaaaaaaaaa
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