LOCUS BC009251 1700 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens farnesyl-diphosphate farnesyltransferase 1, mRNA (cDNA clone MGC:4480 IMAGE:2961623), complete cds. ACCESSION BC009251 VERSION BC009251.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1700) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1700) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC009251.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 10 Row: p Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 67089146. FEATURES Location/Qualifiers source 1..1700 /db_xref="H-InvDB:HIT000034231" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4480 IMAGE:2961623" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1700 /gene="FDFT1" /gene_synonym="DGPT" /gene_synonym="ERG9" /gene_synonym="SQS" /gene_synonym="SS" /db_xref="GeneID:2222" /db_xref="HGNC:HGNC:3629" /db_xref="MIM:184420" CDS 70..1323 /gene="FDFT1" /gene_synonym="DGPT" /gene_synonym="ERG9" /gene_synonym="SQS" /gene_synonym="SS" /codon_start=1 /product="farnesyl-diphosphate farnesyltransferase 1" /protein_id="AAH09251.1" /db_xref="GeneID:2222" /db_xref="HGNC:HGNC:3629" /db_xref="MIM:184420" /translation="MEFVKCLGHPEEFYNLVRFRIGGKRKVMPKMDQDSLSSSLKTCY RYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHS FLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDK HVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIR DYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITY LSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAV KAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHYSPIYLSFVML LAALSWQYLTTLSQVTEDYVQTGEH" BASE COUNT 456 a 397 c 428 g 419 t ORIGIN 1 gccggccggt gagcgcctgg ggaccgcaga ggtgagagtc gcgcccggga gtccgccgcc 61 tgcgccagga tggagttcgt gaaatgcctc ggccaccccg aagagttcta caacctggtg 121 cgcttccgga tcgggggcaa gcggaaggtg atgcccaaga tggaccagga ctcgctcagc 181 agcagcctga aaacttgcta caggtatctc aatcagacca gtcgcagttt cgcagctgtt 241 atccaggcgc tggatgggga aatgcgcaac gcagtgtgca tattttatct ggttctccga 301 gctctggaca cactggaaga tgacatgacc atcagtgtgg aaaagaaggt cccgctgtta 361 cacaactttc actctttcct ttaccaacca gactggcggt tcatggagag caaggagaag 421 gatcgccagg tgctggagga cttcccaacg atctcccttg agtttagaaa tctggctgag 481 aaataccaaa cagtgattgc cgacatttgc cggagaatgg gcattgggat ggcagagttt 541 ttggataagc atgtgacctc tgaacaggag tgggacaagt actgccacta tgttgctggg 601 ctggtcggaa ttggcctttc ccgtcttttc tcagcctcag agtttgaaga ccccttagtt 661 ggtgaagata cagaacgtgc caactctatg ggcctgtttc tgcagaaaac aaacatcatc 721 cgtgactatc tggaagacca gcaaggagga agagagttct ggcctcaaga ggtttggagc 781 aggtatgtta agaagttagg ggattttgct aagccggaga atattgactt ggccgtgcag 841 tgcctgaatg aacttataac caatgcactg caccacatcc cagatgtcat cacctacctt 901 tcgagactca gaaaccagag tgtgtttaac ttctgtgcta ttccacaggt gatggccatt 961 gccactttgg ctgcctgtta taataaccag caggtgttca aaggggcagt gaagattcgg 1021 aaagggcaag cagtgaccct gatgatggat gccaccaata tgccagctgt caaagccatc 1081 atatatcagt atatggaaga gatttatcat agaatccccg actcagaccc atcttctagc 1141 aaaacaaggc agatcatctc caccatccgg acgcagaatc ttcccaactg tcagctgatt 1201 tcccgaagcc actactcccc catctacctg tcgtttgtca tgcttttggc tgccctgagc 1261 tggcagtacc tgaccactct ctcccaggta acagaagact atgttcagac tggagaacac 1321 tgatcccaaa tttgtccata gctgaagtcc accataaagt ggatttactt tttttcttta 1381 aggatggatg ttgtgttctc tttatttttt tcctactact ttaatcccta aaagaacgct 1441 gtgtggctgg gacctttagg aaagtgaaat gcaggtgaga agaacctaaa catgaaagga 1501 aagggtgcct catcccagca acctgtcctt gtgggtgatg atcactgtgc tgcttgcggc 1561 tcatggcaga gcattcagtg ccacggttta ggtgaagtcg ctgcatatgt gactgtcatg 1621 agatcctact tagtatgatc ctggctagaa tgataattaa aagtatttaa tttgaaaaaa 1681 aaaaaaaaaa aaaaaaaaaa //