LOCUS       BC009234                1185 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens major histocompatibility complex, class II, DR beta 5,
            mRNA (cDNA clone MGC:16550 IMAGE:4054398), complete cds.
ACCESSION   BC009234
VERSION     BC009234.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1185)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1185)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUN-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Dec 19, 2003 this sequence version replaced BC009234.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Louis Staudt
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 25 Row: o Column: 17.
FEATURES             Location/Qualifiers
     source          1..1185
                     /db_xref="H-InvDB:HIT000034216"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:16550 IMAGE:4054398"
                     /tissue_type="Primary B-Cells from Tonsils"
                     /clone_lib="NIH_MGC_48"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1185
                     /gene="HLA-DRB5"
                     /db_xref="GeneID:3127"
                     /db_xref="HGNC:HGNC:4953"
                     /db_xref="MIM:604776"
     CDS             44..844
                     /gene="HLA-DRB5"
                     /codon_start=1
                     /product="major histocompatibility complex, class II, DR
                     beta 5"
                     /protein_id="AAH09234.1"
                     /db_xref="GeneID:3127"
                     /db_xref="HGNC:HGNC:4953"
                     /db_xref="MIM:604776"
                     /translation="MVCLKLPGGSYMAKLTVTLMVLSSPLALAGDTRPRFLQQDKYEC
                     HFFNGTERVRFLHRDIYNQEEDLRFDSDVGEYRAVTELGRPDAEYWNSQKDFLEDRRA
                     AVDTYCRHNYGVGESFTVQRRVEPKVTVYPARTQTLQHHNLLVCSVNGFYPGSIEVRW
                     FRNSQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWR
                     AQSESAQSKMLSGVGGFVLGLLFLGAGLFIYFKNQKGHSGLHPTGLVS"
BASE COUNT          272 a          319 c          327 g          267 t
ORIGIN      
        1 cttgcctgct cctctggccc ctggtcctgt cctgttctcc agcatggtgt gtctgaagct
       61 ccctggaggt tcctacatgg caaagctgac agtgacactg atggtgctga gctccccact
      121 ggctttggct ggggacaccc gaccacgttt cttgcagcag gataagtatg agtgtcattt
      181 cttcaacggg acggagcggg tgcggttcct gcacagagac atctataacc aagaggagga
      241 cttgcgcttc gacagcgacg tgggggagta ccgggcggtg acggagctgg ggcggcctga
      301 cgctgagtac tggaacagcc agaaggactt cctggaagac aggcgcgccg cggtggacac
      361 ctactgcaga cacaactacg gggttggtga gagcttcaca gtgcagcggc gagttgagcc
      421 taaggtgact gtgtatcctg caaggaccca gaccctgcag caccacaacc tcctggtctg
      481 ctctgtgaat ggtttctatc caggcagcat tgaagtcagg tggttccgga acagccagga
      541 agagaaggct ggggtggtgt ccacaggcct gattcagaat ggagactgga ccttccagac
      601 cctggtgatg ctggaaacag ttcctcgaag tggagaggtt tacacctgcc aagtggagca
      661 cccaagcgtg acgagccctc tcacagtgga atggagagca cagtctgaat ctgcacagag
      721 caagatgctg agtggagtcg ggggctttgt gctgggcctg ctcttccttg gggccgggct
      781 attcatctac ttcaagaatc agaaagggca ctctggactt cacccaacag gactcgtgag
      841 ctgaagtgca gatgaccaca ttcaaggggg aaccttctgc cccagctttg catgatgaaa
      901 agctttcctg cttggctctt attcttccac aagagaggac tttctcaggc cctggttgct
      961 accggttcag caactctgca gaaaatgtcc atccttgtgg cttcctcagc tcctgccctt
     1021 ggcctgaagt cccagcattg atggcagtgc ctcatcttca actttagtgc tcccctttac
     1081 ctaaccctac ggcctcccat gcatctgtac tccccctgtg tgccacaaat gcactacgtt
     1141 attaaatttt tctgaagccc agaaaaaaaa aaaaaaaaaa aaaaa
//