LOCUS BC009202 3478 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens chromosome 14 open reading frame 43, mRNA (cDNA clone
IMAGE:3614143), partial cds.
ACCESSION BC009202
VERSION BC009202.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3478)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3478)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009202.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: g Column: 1.
FEATURES Location/Qualifiers
source 1..3478
/db_xref="H-InvDB:HIT000087221"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3614143"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>3478
/gene="C14orf43"
/gene_synonym="c14_5541"
/db_xref="GeneID:91748"
CDS 405..>3478
/gene="C14orf43"
/gene_synonym="c14_5541"
/codon_start=1
/product="C14orf43 protein"
/protein_id="AAH09202.1"
/db_xref="GeneID:91748"
/translation="MNLQAQPKAQNKRKRCLFGGQEPAPKEQPPPLQPPQQSIRVKEE
QYLGHEGPGGAVSTSQPVELPPPSSLALLNSVVYGPERTSAAMLSQQVASVKWPNSVM
APGRGPERGGGGGVSDSSWQQQPGQPPPHSTWNCHSLSLYSATKGSPHPGVGVPTYYN
HPEALKREKAGGPQLDRYVRPMMPQKVQLEVGRPQAPLNSFHAAKKPPNQSLPLQPFQ
LAFGHQVNRQVFRQGPPPPNPVAAFPPQKQQQQQQPQQQQQQQQAALPQMPLFENFYS
MPQQPSQQPQDFGLQPAGPLGQSHLAHHSMAPYPFPPNPDMNPELRKALLQDSAPQPA
LPQVQIPFPRRSRRLSKEGILPPSALDGAGTQPGQEATGNLFLHHWPLQQPPPGSLGQ
PHPEALGFPLELRESQLLPDGERLAPNGREREAPAMGSEEGMRAVSTGDCGQVLRGGV
IQSTRRRRRASQEANLLTLAQKAVELASLQNAKDGSGSEEKRKSVLASTTKCGVEFSE
PSLATKRAREDSGMVPLIIPVSVPVRTVDPTEAAQAGGLDEDGKGLEQNPAEHKPSVI
VTRRRSTRIPGTDAQAQAEDMNVKLEGEPSVRKPKQRPRPEPLIIPTKAGTFIAPPVY
SDITPYQSHLRSPVRLADHPSERSFELPPYTPPPILSPVREGSGLYFNAIISTSTIPA
PPPITPKSAHRTLLRTNSAEVTPPVLSVMGEATPVSIEPRINVGSRFQAEIPLMRDRA
LAAADPHKADLVWQPWEDLESSREKQRQVEDLLTAACSSIFPGAGTNQELALHCLHES
RGDILETLNKLLLKKPLRPHNHPLATYHYTGSDQWKMAERKLFNKGIAIYKKDFFLVQ
KLIQTKTVAQCVEFYYTYKKQVKIGRNGTLTFGDVDTSDEKSAQEEVEVDIKTSQKFP
RVPLPRRESPSEERLEPKREVKEPRKEGEEEVPEIQEKEEQEEGRERSRRAAAVKATQ
TLQANESASDILILRSHESNAPGSAGGQASEKPREGTGKSRRALPFSKKKKK"
misc_feature 2901..3032
/gene="C14orf43"
/gene_synonym="c14_5541"
/note="SANT; Region: SANT SWI3, ADA2, N-CoR and TFIIIB''
DNA-binding domains"
/db_xref="CDD:smart00717"
BASE COUNT 782 a 1136 c 1024 g 536 t
ORIGIN
1 gctgggtcac agcccgggcc gcacagcccg ggccgcaccg cccgctccgc gaggaagtga
61 cgactgcgcc gtcccgagag caacaaagtt agagtctgcg ggccgcactc gcctgcgccc
121 cgcacccctc cgagcagccc ggggatccag cacgcaggtg ccagaaccct gtggagcatc
181 atgaactggg aagagtagct gagccccaga gcctctctgg aagagaaagg aagagccagc
241 agttctttct cccagtgtcc gacctcaccg tccagcgtct tcctctgccc ctgctctgcc
301 ctccctggct cctggactag agcccggctt ccagcaggac gtttccccag gggatgggcg
361 actgttgaag gggatctcac cgccagggct cagttggcca catcatgaac ctccaggccc
421 agcccaaggc tcagaacaag cggaagcgtt gcctctttgg gggccaggaa ccagctccca
481 aggagcagcc ccctcccctg cagccccccc agcagtccat cagagtgaag gaggagcagt
541 acctcgggca cgagggtcca ggaggggcag tctccacctc tcagcctgtg gaactgcccc
601 ctcctagcag cctggccctg ctgaactctg tggtgtatgg gcctgagcgg acctcagcag
661 ccatgctgtc ccagcaggtg gcctcagtaa agtggcccaa ctctgtgatg gctccagggc
721 ggggcccgga gcgtggagga ggtgggggtg tcagtgacag cagctggcag cagcagccag
781 gccagcctcc accccattca acatggaact gccacagtct gtccctctac agtgcaacca
841 aggggagccc gcatcctgga gtgggagtcc cgacttacta taaccaccct gaggcactga
901 agcgggagaa agcggggggc ccacagctgg accgctatgt gcgaccaatg atgccacaga
961 aggtgcagct ggaggtaggg cggccccagg cacccctgaa ttctttccac gcagccaaga
1021 aacccccaaa ccagtcactg cccctgcaac ccttccagct ggcattcggc caccaggtga
1081 accggcaggt cttccggcag ggcccaccgc ccccaaaccc ggtggctgcc ttccctccac
1141 agaagcagca gcagcagcag caaccacagc agcagcagca gcagcagcag gcagccctac
1201 cccagatgcc gctctttgag aacttctatt ccatgccaca gcaaccctcg cagcaacccc
1261 aggactttgg cctgcagcca gctgggccac tgggacagtc ccacctggct caccacagca
1321 tggcacccta ccccttcccc cccaacccag atatgaaccc agaactgcgc aaggcccttc
1381 tgcaggactc agccccgcag ccagcgctac ctcaggtcca gatccccttc ccccgccgct
1441 cccgccgcct ctctaaggag ggtatcctgc ctcccagcgc cctggatggg gctggcaccc
1501 agcctgggca ggaggccact ggcaacctgt tcctacatca ctggcccctg cagcagccgc
1561 cacctggctc cctggggcag ccccatcctg aagctctggg attcccgctg gagctgaggg
1621 agtcgcagct actgcctgat ggggagagac tagcacccaa tggccgggag cgagaggctc
1681 ctgccatggg cagcgaggag ggcatgaggg cagtgagcac aggggactgt gggcaggtgc
1741 tacggggcgg agtgatccag agcacgcgac ggaggcgccg ggcatcccag gaggccaatt
1801 tgctgaccct ggcccagaag gctgtggagc tggcctcact gcagaatgca aaggatggca
1861 gtggttctga agagaagcgg aaaagtgtat tggcctcaac taccaagtgt ggggtggagt
1921 tttctgagcc ttccttagcc accaagcgag cacgagaaga cagtgggatg gtacccctca
1981 tcatcccagt gtctgtgcct gtgcgaactg tggacccaac tgaggcagcc caggctggag
2041 gtcttgatga ggacgggaag ggtcttgaac agaaccctgc tgagcacaag ccatcagtca
2101 tcgtcacccg caggcggtcc acccgaatcc ccgggacaga tgctcaagct caggcggagg
2161 acatgaatgt caagttggag ggggagcctt ccgtgcggaa accaaagcag cggcccaggc
2221 ccgagcccct catcatcccc accaaggcgg gcactttcat cgcccctccc gtctactccg
2281 acatcacccc ataccagagc cacctgcgct ctcccgtgcg cctagctgac cacccctctg
2341 agcggagctt tgagctacct ccctacacgc cgccccccat cctcagccct gtgcgggaag
2401 gctctggcct ctacttcaat gccatcatat caaccagcac catccctgcc cctcctccca
2461 tcacgcctaa gagtgcccat cgcacgctgc tccggactaa cagtgctgaa gtaaccccgc
2521 ctgtcctctc tgtgatgggg gaggccaccc cagtgagcat cgagccacgg atcaacgtgg
2581 gctcccggtt ccaggcagaa atccccttga tgagggaccg tgccctggca gctgcagatc
2641 cccacaaggc tgacttggtg tggcagccat gggaggacct agagagcagc cgggagaagc
2701 agaggcaagt ggaagacctg ctgacagccg cctgctccag cattttccct ggtgctggca
2761 ccaaccagga gctggccctg cactgtctgc acgaatccag aggagacatc ctggaaacgc
2821 tgaataagct gctgctgaag aagcccctgc ggccccacaa ccatccgctg gcaacttatc
2881 actacacagg ctctgaccag tggaagatgg ccgagaggaa gctgttcaac aaaggcattg
2941 ccatctacaa gaaggatttc ttcctggtgc agaagctgat ccagaccaag accgtggccc
3001 agtgcgtgga gttctactac acctacaaga agcaggtgaa aatcggccgc aatgggactc
3061 taacctttgg ggatgtggat acgagcgatg agaagtcggc ccaggaagag gttgaagtgg
3121 atattaagac ttcccaaaag ttcccaaggg tgcctcttcc cagaagagag tccccaagtg
3181 aagagaggct ggagcccaag agggaggtga aggagcccag gaaggagggg gaggaggagg
3241 tgccagagat ccaagagaag gaggagcagg aagaggggcg agagcgcagc aggcgggcag
3301 cggcagtcaa agccacgcag acactacagg ccaatgagtc ggccagtgac atcctcatcc
3361 tccggagcca cgagtccaac gcccctgggt ctgccggtgg ccaggcctcg gagaagccaa
3421 gggaagggac agggaagtca cgaagggcac tacctttttc aaaaaaaaaa aaaaaaaa
//