LOCUS BC009116 3537 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens TSPY-like 4, mRNA (cDNA clone IMAGE:4154047), partial
cds.
ACCESSION BC009116
VERSION BC009116.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3537)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3537)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: n Column: 14.
FEATURES Location/Qualifiers
source 1..3537
/db_xref="H-InvDB:HIT000034177"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4154047"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3537
/gene="TSPYL4"
/gene_synonym="dJ486I3.2"
/db_xref="GeneID:23270"
/db_xref="HGNC:HGNC:21559"
CDS <1..709
/gene="TSPYL4"
/gene_synonym="dJ486I3.2"
/codon_start=2
/product="TSPYL4 protein"
/protein_id="AAH09116.2"
/db_xref="GeneID:23270"
/db_xref="HGNC:HGNC:21559"
/translation="QKEKKVAGGVKEETRPRAPKINNCMDSLEAIDQELSNVNAQADR
AFLQLERKFGRMRRLHMQRRSFIIQNIPGFWVTAFRNHPQLSPMISGQDEDMLRYMIN
LEVEELKHPRAGCKFKFIFQGNPYFRNEGLVKEYERRSSGRVVSLSTPIRWHRGQDPQ
AHIHRNREGNTIPSFFNWFSDHSLLEFDRIAEIIKGELWPNPLQYYLMGEGPRRGIRG
PPRQPVESARSFRFQSG"
BASE COUNT 909 a 821 c 755 g 1052 t
ORIGIN
1 gcagaaggaa aaaaaggtgg caggaggggt gaaagaggag acacggccca gggccccgaa
61 gatcaataac tgcatggact cactggaggc catcgatcaa gagttgtcaa acgtaaatgc
121 ccaggctgac agggccttcc ttcagcttga gcgcaagttt ggccgcatgc gaaggctcca
181 catgcagcgc agaagtttca ttatccagaa tatcccaggt ttctgggtta ctgcctttcg
241 aaaccacccc cagctgtcac ctatgatcag tggccaagat gaagacatgc tgaggtacat
301 gatcaatttg gaggtggagg agcttaaaca ccccagagca ggctgcaaat tcaagttcat
361 ctttcagggc aacccctact tccgaaatga ggggcttgtc aaggaatatg aacgcagatc
421 ctctggccgg gtggtgtctc tttccactcc aatccgctgg caccgaggcc aagaccccca
481 ggctcatatc cacagaaacc gggaagggaa cactatccct agtttcttca actggttttc
541 agaccacagc cttctagaat tcgacagaat tgcagagatt atcaaaggag aactgtggcc
601 caatccccta caatactacc tgatgggtga agggccccgt agaggaattc gaggcccacc
661 aaggcagcca gtggagagcg ccagatcctt caggttccag tctggctaat ctctgtcctg
721 tgagaagctt ctgcacaagt ttccttacca cctcctcttg gacctatgct tggccaacag
781 catgcagtct tccatctgct ttctcttcat actgtggatt atcttttcct tggttctaaa
841 tcttcagtaa tcggttgcaa gattgttggc ttacctgcct gtgccattct tcctctgggc
901 cttcatgctt ttctgcattg tgttaacatg tttcaagtgc atggccttct acggcttcta
961 tgccaagcgt atgatactat agatatagtg taccatactg cctttctttg catggcttgg
1021 accctatctg tgaccatgct cttctcccaa tttaagtggt tctgtaccac aaagaatctt
1081 gatacatttt cacaaataac tgattgggct tcatacttta tgctggctgt gtcctgatac
1141 ccatgtactt atggtaagct atttgggtat taccactgca agacaaaact gatatcttaa
1201 cccggccatc aacccaaatt ggacattcca gactaccacc aactggatcc cagctgcctt
1261 cctgggcttg tgccatccac cctactggtt atctgataga acaagctggt ggctgatggg
1321 tgactgctag gcgtgactga ggtaatagat gaaaagtgtt ctatgttatc acattggttt
1381 tcctgtacct ttggttactc tacgtcatga ccagctgctg gtgagtatga agcctgtgct
1441 atagcccacc cctactcact ctcaccttct ggttgaactt tgcttaggcc accattgtct
1501 gcctcatcag gaactatctg tagacgtagc tcccagggag ctcacagcaa caccccctac
1561 caccaggatg ggcagtaata tgtgacagag cccaaagcaa ggctggaacg cagtcccttc
1621 cagcttagtc tttctgactc ctagccaaca aaccatcctt aatgtgagca acttctttag
1681 gcatttcctc ttttccccgc ctgcacccac tctgaacatg acaaaagttg ccagagttgg
1741 ggcattgagg aagagatatt tctggaatgt gagacttgtt atgcctctgt ctctttctct
1801 ccctcctcct cccctctccc tccccctctc cctcccatcc cttttcttcc ctttcactct
1861 gaagcagttt tagcttatta acagaaaaca aaactggcaa agcaggcttt ttgtttaatt
1921 tgctctttcc ctgattgtgt tcagagagaa aggttatgat taaatgggct ccagatctct
1981 tattgccctt attcctccac cccacttctt ttagcaaggt ctgaaagttt caaagggaga
2041 cctataggtt aattgtttag ttataggcag tgttaaatta ggcagatttt gacatattta
2101 tctttttacc ccatccattc taccaaaacc tgtgtatttc ttgagttttt agtttgagaa
2161 gctggaaaga gagagaaggg cctcacagtg atgggttcag gacgggtcaa aggcaaaggc
2221 ctttgtgatg tgagcaaagg caaccaaaac ttagcctcac tccacttttc taaagatgga
2281 aattcttttt tgggccttgg actgcttcta gggtagcatt ttgtaggtca ctcttctcct
2341 ttgtactatt ttgtttctgc cctgatgtcc cttgggtctc catcctactg cctggctttc
2401 ttggccctca tttctcagct tctgcatttc cttccctgct cctaacaaat gaagaagcag
2461 gctgcagcct gcattgtgga agatctccag cctccttgta ggggataagg ggatgtgcag
2521 catctgtgtg gattttcacg gacaagttcc agtaggtggg acagtgatgc cgtcaaggct
2581 tagttatgat catgtgtggt gataaagacc atccaccatc acccttttcc cctttgggtt
2641 tgaaggcctt gccctaagct acctgagggt ttaggaggtc tgaacacaca cagtggagag
2701 gttaatctag gttgggaaac tgagtaaaag tccagagcag gaatgagcct gctgtggcgt
2761 gggtttggaa aggctcacag gaaagaacct gcaggatcag gggtgggagg ggaggcccct
2821 gaggtgctct ccagggaaga ggggctgggg tttaaatagc atgcttggag gaagattttc
2881 cttcaatttt tcctaagtcc ttgaattcac cagtagattt ttgtaaacaa aatgtaagtc
2941 gatgttttct ctcaattatc ctaggagtga cctttatatg tgtggaagat taatggtata
3001 tgctccttat gtcactgttt ttgagtaaaa tccatttcct ttctctgttt cagcctatga
3061 caaaattgat gtttacaggc ctgctttttg cttataattg acaacatgtg caaaaatacc
3121 aaatttgtgt cctgtgcagt atgaagaatt cagtgaatat tcattaatgt attagcttgt
3181 tttgctctct gttcatatat ggctctattc ttagaaatat aatttgaatg tgatctttca
3241 atagtctgaa tattttacaa attatagcta tgtcttgtga aaataacctc aaaaagaaaa
3301 atacgactct gttgtcttac ttgatatttc ttgccctagt aatgtacttg acatttatgt
3361 tcctaagcag tgtaagtacc agtagaattt ctctgtcaaa ctcaatgatc atttagtact
3421 tttgtcttct cccatgtgct tgaaggaaaa ataaagtgtc actaccgtat ttcttgtttt
3481 catcaaaaaa taaaaataat ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//