LOCUS BC009046 1798 bp mRNA linear HUM 12-JAN-2007 DEFINITION Homo sapiens neurogenic differentiation 1, mRNA (cDNA clone MGC:9038 IMAGE:3873419), complete cds. ACCESSION BC009046 VERSION BC009046.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1798) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1798) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: m Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4505376. FEATURES Location/Qualifiers source 1..1798 /db_xref="H-InvDB:HIT000034152" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9038 IMAGE:3873419" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1798 /gene="NEUROD1" /gene_synonym="BETA2" /gene_synonym="BHF-1" /db_xref="GeneID:4760" /db_xref="HGNC:HGNC:7762" /db_xref="MIM:601724" CDS 69..1139 /gene="NEUROD1" /gene_synonym="BETA2" /gene_synonym="BHF-1" /codon_start=1 /product="neurogenic differentiation 1" /protein_id="AAH09046.1" /db_xref="GeneID:4760" /db_xref="HGNC:HGNC:7762" /db_xref="MIM:601724" /translation="MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLE AMNAEEDSLRNGGEEEDEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLR RMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSG KSPDLVSFVQTLCKGLSQPTTNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHP YSYQSPGLPSPPYGTMDSSHVFHVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPP LSINGNFSFKHEPSAEFEKNYAFTMHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIM SFDSHSHHERVMSAQLNAIFHD" BASE COUNT 521 a 453 c 390 g 434 t ORIGIN 1 gtccggaggc cccagggtta tgagactatc actgctcagg acctactaac aacaaaggaa 61 atcgaaacat gaccaaatcg tacagcgaga gtgggctgat gggcgagcct cagccccaag 121 gtcctccaag ctggacagac gagtgtctca gttctcagga cgaggagcac gaggcagaca 181 agaaggagga cgacctcgaa gccatgaacg cagaggagga ctcactgagg aacgggggag 241 aggaggagga cgaagatgag gacctggaag aggaggaaga agaggaagag gaggatgacg 301 atcaaaagcc caagagacgc ggccccaaaa agaagaagat gactaaggct cgcctggagc 361 gttttaaatt gagacgcatg aaggctaacg cccgggagcg gaaccgcatg cacggactga 421 acgcggcgct agacaacctg cgcaaggtgg tgccttgcta ttctaagacg cagaagctgt 481 ccaaaatcga gactctgcgc ttggccaaga actacatctg ggctctgtcg gagatcctgc 541 gctcaggcaa aagcccagac ctggtctcct tcgttcagac gctttgcaag ggcttatccc 601 aacccaccac caacctggtt gcgggctgcc tgcaactcaa tcctcggact tttctgcctg 661 agcagaacca ggacatgccc ccccacctgc cgacggccag cgcttccttc cctgtacacc 721 cctactccta ccagtcgcct gggctgccca gtccgcctta cggtaccatg gacagctccc 781 atgtcttcca cgttaagcct ccgccgcacg cctacagcgc agcgctggag cccttctttg 841 aaagccctct gactgattgc accagccctt cctttgatgg acccctcagc ccgccgctca 901 gcatcaatgg caacttctct ttcaaacacg aaccgtccgc cgagtttgag aaaaattatg 961 cctttaccat gcactatcct gcagcgacac tggcaggggc ccaaagccac ggatcaatct 1021 tctcaggcac cgctgcccct cgctgcgaga tccccataga caatattatg tccttcgata 1081 gccattcaca tcatgagcga gtcatgagtg cccagctcaa tgccatattt catgattaga 1141 ggcacgccag tttcaccatt tccgggaaac gaacccactg tgcttacagt gactgtcgtg 1201 tttacaaaag gcagcccttt gggtactact gctgcaaagt gcaaatactc caagcttcaa 1261 gtgatatatg tatttattgt cattactgcc tttggaagaa acaggggatc aaagttcctg 1321 ttcaccttat gtattatttt ctatagctct tctatttaaa aaataaaaaa atacagtaaa 1381 gtttaaaaaa tacaccacga atttggtgtg gctgtattca gatcgtatta attatctgat 1441 cgggataaca aaatcacaag caataattag gatctatgca atttttaaac tagtaatggg 1501 ccaattaaaa tatatataaa tatatatttt tcaaccagca ttttactact tgttaccttt 1561 cccatgctga attattttgt tgtgattttg tacagaattt ttaatgactt tttataatgt 1621 ggatttccta ttttaaaacc atgcagcttc atcaattttt atacatatca gaaaagtaga 1681 attatatcta atttatacaa aataatttaa ctaatttaaa ccagcagaaa agtgcttaga 1741 aagttattgt gttgccttag cacttctttc ctctccaatt gtaaaaaaaa aaaaaaaa //