LOCUS BC009032 1090 bp mRNA linear HUM 30-MAR-2005
DEFINITION Homo sapiens protein phosphatase 2 (formerly 2A), regulatory
subunit B'', beta, mRNA (cDNA clone IMAGE:4214447), complete cds.
ACCESSION BC009032
VERSION BC009032.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1090)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1090)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: n Column: 14
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1090
/db_xref="H-InvDB:HIT000034147_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4214447"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1090
/gene="PPP2R3B"
/gene_synonym="B''"
/gene_synonym="NY-REN-8"
/gene_synonym="PP2A"
/gene_synonym="PPP2R3L"
/gene_synonym="PPP2R3LY"
/db_xref="GeneID:28227"
/db_xref="MIM:300339"
CDS 419..949
/gene="PPP2R3B"
/gene_synonym="B''"
/gene_synonym="NY-REN-8"
/gene_synonym="PP2A"
/gene_synonym="PPP2R3L"
/gene_synonym="PPP2R3LY"
/codon_start=1
/product="PPP2R3B protein"
/protein_id="AAH09032.1"
/db_xref="GeneID:28227"
/db_xref="MIM:300339"
/translation="MDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLD
LVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSD
WEKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGA
VDLYEYACGDEDLEPL"
BASE COUNT 227 a 318 c 363 g 182 t
ORIGIN
1 ggtggcacaa gactgtcacg cgaggtctga ggaagggggt ggcccaggcc ccaggtcggg
61 ggttcttgtc gggcgctggg cctgagtgag cagtaacaaa ggtgcactcc tgaccctgcc
121 tggatctggg gaaaaccctc tggccacggg gcctccacct cctccccgga gaggcaggag
181 gggggcagga ggagggccgg gcccgggggg gggctcccct caccgaggcg cgtggacagg
241 ggctccgttc ctgtgaagct ctccctgaca tgcatcttcg tctctccatc ctggctttgg
301 atctagaggc agaaaagtgc agaaggaagg gaagatcagc tatgccgact ttgtctggtt
361 tttgatctct gaggaagaca aaaaaacacc gaccagcatc gagtactggt tccgctgcat
421 ggacctggac ggggacggcg ccctgtccat gttcgagctc gagtacttct acgaggagca
481 gtgccgaagg ctggacagca tggccatcga ggccctgccc ttccaggact gcctctgcca
541 gatgctggac ctggtcaagc cgaggactga agggaagatc acgctgcagg acctgaagcg
601 ctgcaagctg gccaacgtct tcttcgacac cttcttcaac atcgagaagt acctcgacca
661 cgagcagaaa gagcagatct ccctgctcag ggacggtgac agcggcggcc ccgagctctc
721 ggactgggag aagtacgcgg ccgaggagta cgacatcctg gtggccgagg agaccgcggg
781 agagccctgg gaggacgggt tcgaggccga gctcagcccc gtggagcaga agctgagtgc
841 gctgcgctcc ccgctggccc agaggccctt cttcgaggcg ccctcaccgc tgggcgccgt
901 ggacctgtac gagtacgcgt gcggggacga ggacctggag ccgctgtgac gccgcccgcg
961 agaacgccgc cgcggggccg ccccccacgt gccaccaccg ggccaccgcg gctcgtgtaa
1021 aaactgttgt ggaaaatgag tgcgtttgta cggaatgata aacttttatt tattcaaaaa
1081 aaaaaaaaaa
//