LOCUS BC009014 1171 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ganglioside-induced differentiation-associated protein
1-like 1, mRNA (cDNA clone MGC:17273 IMAGE:4155653), complete cds.
ACCESSION BC009014
VERSION BC009014.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1171)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1171)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: c Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30581159.
FEATURES Location/Qualifiers
source 1..1171
/db_xref="H-InvDB:HIT000034140"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17273 IMAGE:4155653"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1171
/gene="GDAP1L1"
/gene_synonym="dJ881L22.1"
/gene_synonym="dJ995J12.1.1"
/db_xref="GeneID:78997"
/db_xref="HGNC:HGNC:4213"
CDS 17..1120
/gene="GDAP1L1"
/gene_synonym="dJ881L22.1"
/gene_synonym="dJ995J12.1.1"
/codon_start=1
/product="ganglioside-induced differentiation-associated
protein 1-like 1"
/protein_id="AAH09014.1"
/db_xref="GeneID:78997"
/db_xref="HGNC:HGNC:4213"
/translation="MATPNNLTPTNCSWWPISALESDAAKPAEAPDAPEAASPAHWPR
ESLVLYHWTQSFSSQKVRLVIAEKGLVCEERDVSLPQSEHKEPWFMRLNLGEEVPVII
HRDNIISDYDQIIDYVERTFTGEHVVALMPEVGSLQHARVLQYRELLDALPMDAYTHG
CILHPELTTDSMIPKYATAEIRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKI
LEHDDVSYLKKILGELAMVLDQIEAELEKRKLENEGQKCELWLCGCAFTLADVLLGAT
LHRLKFLGLSKKYWEDGSRPNLQSFFERVQRRFAFRKVLGDIHTTLLSAVIPNAFRLV
KRKPPSFFGASFLMGSLGGMGYFAYWYLKKKYI"
BASE COUNT 265 a 359 c 340 g 207 t
ORIGIN
1 ctgattccgg gctgtcatgg cgacccccaa caatctgacc cccaccaact gcagctggtg
61 gcccatctcc gcgctggaga gcgatgcggc caagccagcg gaggcccccg acgctcccga
121 ggcggccagc cccgcccatt ggcccaggga gagcctggtt ctgtaccact ggacccagtc
181 cttcagctcg cagaaggtgc ggctggtgat cgccgagaag ggcctggtgt gcgaggagcg
241 ggacgtgagc ctgccacaga gcgagcacaa ggagccctgg ttcatgcggc tcaacctggg
301 cgaggaggtg cccgtcatca tccaccgcga caacatcatc agtgactatg accagatcat
361 tgactatgtg gagcgcacct tcacaggaga gcacgtggtg gccctgatgc ccgaggtggg
421 cagcctgcag cacgcacggg tgctgcagta ccgggagctg ctggacgcac tgcccatgga
481 tgcctacacg catggctgca tcctgcatcc cgagctcacc accgactcca tgatccccaa
541 gtacgccacg gccgagatcc gcagacattt agccaatgcc accacggacc tcatgaaact
601 ggaccatgaa gaggagcccc agctctccga gccctacctt tctaaacaaa agaagctcat
661 ggccaagatc ttggagcatg atgatgtgag ctacctgaag aagatcctcg gggaactggc
721 catggtgctg gaccagattg aggcggagct ggagaagagg aagctggaga acgaggggca
781 gaaatgcgag ctgtggctct gtggctgtgc cttcaccctc gctgatgtcc tcctgggagc
841 caccctgcac cgcctcaagt tcctgggact gtccaagaaa tactgggaag atggcagccg
901 gcccaacctg cagtccttct ttgagagggt ccagagacgc tttgccttcc ggaaagtcct
961 gggtgacatc cacaccaccc tgctgtcggc cgtcatcccc aatgctttcc ggctggtcaa
1021 gaggaaaccc ccatccttct tcggggcgtc cttcctcatg ggctccctgg gtgggatggg
1081 ctactttgcc tactggtacc tcaagaaaaa atacatctag ggccaggcct ggggcttggt
1141 gtctgacaaa aaaaaaaaaa aaaaaaaaaa a
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