LOCUS       BC008986                1258 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens rhabdoid tumor deletion region gene 1, mRNA (cDNA
            clone MGC:16968 IMAGE:4339021), complete cds.
ACCESSION   BC008986
VERSION     BC008986.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1258)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1258)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Lou Staudt
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 12 Row: o Column: 22
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 22209005.
FEATURES             Location/Qualifiers
     source          1..1258
                     /db_xref="H-InvDB:HIT000034126"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:16968 IMAGE:4339021"
                     /tissue_type="Lymph, lymphoma"
                     /clone_lib="NIH_MGC_85"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1258
                     /gene="RTDR1"
                     /gene_synonym="MGC16968"
                     /db_xref="GeneID:27156"
                     /db_xref="HGNC:HGNC:13437"
                     /db_xref="MIM:605663"
     CDS             127..1173
                     /gene="RTDR1"
                     /gene_synonym="MGC16968"
                     /codon_start=1
                     /product="rhabdoid tumor deletion region gene 1"
                     /protein_id="AAH08986.1"
                     /db_xref="GeneID:27156"
                     /db_xref="HGNC:HGNC:13437"
                     /db_xref="MIM:605663"
                     /translation="MAHSQNSLELPININATQITTAYGHRALPKLKEELQSEDLQTRQ
                     KALMALCDLMHDPECIYKAMNIGCMENLKALLKDSNSMVRIKTTEVLHITASHSVGRY
                     AFLEHDIVLALSFLLNDPSPVCRGNLYKAYMQLVQVPRGAQEIISKGLISSLVWKLQV
                     EVEEEEFQEFILDTLVLCLQEDATEALGSNVVLVLKQKLLSANQNIRSKAARALLNVS
                     ISREGKKQVCHFDVIPILVHLLKDPVEHVKSNAAGALMFATVITEGKYAALEAQAIGL
                     LLELLHSPMTIARLNATKALTMLAEAPEGRKALQTHVPTFRAMEVETYEKPQVAEALQ
                     RAARIAISVIEFKP"
BASE COUNT          322 a          349 c          347 g          240 t
ORIGIN      
        1 acgatgtcgc ctggcaactg aataggttgg ccagtggcgc gggctactgg aagcagaaag
       61 ggctgcggag gcagtgagtg gtttctgcag agcttcattt ggaaaggcct ctgtagttgg
      121 ggaaagatgg cccattccca gaactccttg gagcttccca ttaacatcaa tgccacccag
      181 attaccactg cctatggcca tcgggccctg cccaagctga aggaggagct gcagtcagag
      241 gacctccaga cgaggcagaa agccctcatg gccctgtgtg acctcatgca tgaccccgag
      301 tgtatctaca aggccatgaa cataggctgt atggagaacc tgaaagcttt gctgaaggat
      361 agcaacagta tggtgcgcat aaagaccacc gaggtgctcc acatcacggc aagccatagc
      421 gtgggcagat acgcctttct agagcacgac atcgtccttg ccctgtcctt cctgctgaat
      481 gaccccagcc cagtctgccg ggggaacctg tacaaggcat acatgcagct ggtccaggtg
      541 cctagagggg cccaagagat catcagcaaa ggtctgattt cctcactggt atggaagctg
      601 caggtggagg tggaggagga ggagttccag gagttcatcc tggacacact ggtcctctgc
      661 ctgcaggagg atgccaccga ggccctgggc agcaatgtgg tgcttgtcct gaagcagaag
      721 ctcctcagcg ccaaccagaa catccgcagc aaggccgccc gtgcgctcct taatgtcagc
      781 atatctcgag agggcaagaa acaggtgtgt cattttgacg tcatccccat cctggtccat
      841 ctgctgaaag acccagtgga gcatgtgaag tctaacgctg ccggtgccct gatgttcgcc
      901 acagtgatca ctgaagggaa gtatgcggcc ctggaggcac aagccatcgg cctgctcctg
      961 gagctgctgc actcccccat gaccatagcg cgcctgaatg ccaccaaggc ccttaccatg
     1021 ctggcagagg cccccgaggg ccgcaaggcc ctgcagacgc acgtgcccac tttccgtgcc
     1081 atggaggtgg agacttacga aaagcctcaa gtggccgaag ccttacagcg ggcagcccgg
     1141 atcgccatca gtgtcatcga gttcaaaccc tgagcccttc attcacctct gtgagtgaat
     1201 aaatgtgcta agtctcttta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//