LOCUS BC008983 1076 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens complement component 1, q subcomponent, B chain, mRNA
(cDNA clone MGC:17227 IMAGE:4212848), complete cds.
ACCESSION BC008983
VERSION BC008983.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1076)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1076)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: m Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11038661.
FEATURES Location/Qualifiers
source 1..1076
/db_xref="H-InvDB:HIT000034124"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17227 IMAGE:4212848"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1076
/gene="C1QB"
/db_xref="GeneID:713"
/db_xref="HGNC:HGNC:1242"
/db_xref="MIM:120570"
CDS 75..836
/gene="C1QB"
/codon_start=1
/product="complement component 1, q subcomponent, B chain"
/protein_id="AAH08983.1"
/db_xref="GeneID:713"
/db_xref="HGNC:HGNC:1242"
/db_xref="MIM:120570"
/translation="MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIP
GTPGPDGQPGTPGIKGEKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPG
APGAPGPKGESGDYKATQKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKF
TCKVPGLYYFTYHASSRGNLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQ
GENVFLQATDKNSLLGMEGANSIFSGFLLFPDMEA"
BASE COUNT 313 a 326 c 265 g 172 t
ORIGIN
1 ggctcctggt cccactgctg ctcagcccag tggcctcaca ggacaccagc ttcccaggag
61 gcgtctgaca cagtatgatg atgaagatcc catggggcag catcccagta ctgatgttgc
121 tcctgctcct gggcctaatc gatatctccc aggcccagct cagctgcacc gggcccccag
181 ccatccctgg catcccgggt atccctggga cacctggccc cgatggccaa cctgggaccc
241 cagggataaa aggagagaaa gggcttccag ggctggctgg agaccatggt gagttcggag
301 agaagggaga cccagggatt cctgggaatc caggaaaagt cggccccaag ggccccatgg
361 gccctaaagg tggcccaggg gcccctggag ccccaggccc caaaggtgaa tcgggagact
421 acaaggccac ccagaaaatc gccttctctg ccacaagaac catcaacgtc cccctgcgcc
481 gggaccagac catccgcttc gaccacgtga tcaccaacat gaacaacaat tatgagcccc
541 gcagtggcaa gttcacctgc aaggtgcccg gtctctacta cttcacctac cacgccagct
601 ctcgagggaa cctgtgcgtg aacctcatgc gtggccggga gcgtgcacag aaggtggtca
661 ccttctgtga ctatgcctac aacaccttcc aggtcaccac cggtggcatg gtcctcaagc
721 tggagcaggg ggagaacgtc ttcctgcagg ccaccgacaa gaactcacta ctgggcatgg
781 agggtgccaa cagcatcttt tccgggttcc tgctctttcc agatatggag gcctgacctg
841 tgggctgctt cacatccacc ccggctcccc ctgccagcaa cgctcactct acccccaaca
901 ccaccccttg cccagccaat gcacacagta gggcttggtg aatgctgctg agtgaatgag
961 taaataaact cttcaaggcc aagggaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//