LOCUS BC008976 1226 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae), mRNA (cDNA clone MGC:9336 IMAGE:3452153), complete cds. ACCESSION BC008976 VERSION BC008976.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1226) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1226) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: a Column: 10. FEATURES Location/Qualifiers source 1..1226 /db_xref="H-InvDB:HIT000034120" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9336 IMAGE:3452153" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1226 /gene="SNF8" /gene_synonym="Dot3" /gene_synonym="EAP30" /gene_synonym="VPS22" /db_xref="GeneID:11267" /db_xref="HGNC:HGNC:17028" CDS 59..835 /gene="SNF8" /gene_synonym="Dot3" /gene_synonym="EAP30" /gene_synonym="VPS22" /codon_start=1 /product="SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)" /protein_id="AAH08976.1" /db_xref="GeneID:11267" /db_xref="HGNC:HGNC:17028" /translation="MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFK TNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGV QIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGI IPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLK EGLAWLDLQAPGEAHYWLPALFTDLYSQEITAEEAREALP" BASE COUNT 326 a 275 c 352 g 273 t ORIGIN 1 ccgggacgtg gagacccggg gtcccggcag ccgggcggcc cgcgggccca gggtggggat 61 gcaccgccgc ggggtgggag ctggcgccat cgccaagaag aaacttgcag aggccaagta 121 taaggagcga gggacggtct tggctgagga ccagctagcc cagatgtcaa agcagttgga 181 catgttcaag accaacctgg aggaatttgc cagcaaacac aagcaggaga tccggaagaa 241 tcctgagttc cgtgtgcagt tccaggacat gtgtgcaacc attggcgtgg atccgctggc 301 ctctggaaaa ggattttggt ctgagatgct gggcgtgggg gacttctatt acgaactagg 361 tgtccaaatt atcgaagtgt gcctggcgct gaagcatcgg aatggaggtc tgataacttt 421 ggaggaacta catcaacagg tgttgaaggg aaggggcaag ttcgcccagg atgtcagtca 481 agatgacctg atcagagcca tcaagaaact aaaggcactt ggcactggct tcggcatcat 541 ccctgtgggc ggcacttacc tcattcagtc tgttccagct gagctcaata tggatcacac 601 cgtggtgctg cagctggcag agaagaatgg ctacgtgact gtcagtgaga tcaaagccag 661 tcttaaatgg gagaccgagc gagcgcggca agtgctggaa cacctgctga aggaagggtt 721 ggcgtggctg gacttacagg ccccagggga ggcccactac tggctgccag ctctcttcac 781 tgacctctac tcccaggaga ttacagctga ggaggccaga gaagccctcc cctgactgca 841 tgtggaaggg cacacagcag caggcaggga ggaggcggag gtggcaaata aacctgggca 901 attttgttta tacaaaaaat agaaaaaaag ttccaagttt ttctttcttc cctcattctt 961 ttatttttga aaagtgcctt cacgttgcat ttttattgga ggaaaacctc gctcgttcag 1021 taagcataat ctgattaaca cagagaacgg caagcacata taaaatgatt tttgtaggtc 1081 atctgcaagt tcatggaaga gctgggccta gaatgtgggt tgtttcctgg cctgtctagt 1141 ctttgtagct gtgagacata gattacagcc tatgctaatt caaacctttt aaataaaatg 1201 ttccttatct caaaaaaaaa aaaaaa //