LOCUS BC008923 1908 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens Bardet-Biedl syndrome 4, mRNA (cDNA clone
IMAGE:3659371), partial cds.
ACCESSION BC008923
VERSION BC008923.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1908)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1908)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC008923.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: a Column: 8.
FEATURES Location/Qualifiers
source 1..1908
/db_xref="H-InvDB:HIT000087171"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3659371"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1908
/gene="BBS4"
/db_xref="GeneID:585"
/db_xref="MIM:600374"
CDS <1..1386
/gene="BBS4"
/codon_start=1
/product="BBS4 protein"
/protein_id="AAH08923.2"
/db_xref="GeneID:585"
/db_xref="MIM:600374"
/translation="LQETQGLCEYAIYVQALIFRLEGNIQESLELFQTCAVLSPQSAD
NLKQVARSLFLLGKHKAAIEVYNEAAKLNQKDWEISHNLGVCYIYLKQFNKAQDQLHN
ALNLNRHDLTYIMLGKIHLLEGDLDKAIEVYKKAVEFSPENTELLTTLGLLYLQLGIY
QKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVVACAVPESPPLWNNI
GMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQ
PKMGELYMLLAVALTNLEDIENAKRAYAEAVHLDKCNPLVNLNYAVLLYNQGEKKNAL
AQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKDPKSKHQTT
STSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPEPAVESS
PTETSEQIREK"
misc_feature 130..426
/gene="BBS4"
/note="TPR; Region: Tetratricopeptide repeat domain"
/db_xref="CDD:cd00189"
BASE COUNT 576 a 435 c 441 g 456 t
ORIGIN
1 cttcaagaga ctcagggatt gtgtgaatat gctatctatg tccaagcatt gatatttcgc
61 ctagaaggaa atatccaaga atccctagaa ctcttccaga catgtgcagt tcttagtcct
121 cagagtgctg ataacctcaa gcaggtggcc agatctttat ttcttttggg aaaacataaa
181 gctgccattg aagtatataa tgaagcagct aaactcaacc agaaagattg ggagatcagc
241 cataacctag gagtttgcta catatacctg aagcagttca acaaggcaca agaccagttg
301 cacaatgccc tgaatcttaa taggcacgat ctgacttata taatgctggg gaagatccac
361 ttgctggagg gagacttgga caaggccatt gaagtctaca agaaagcagt ggagttctca
421 ccagaaaata cagagcttct tacaacttta ggattactct acttacagct cggcatttac
481 cagaaggcat ttgaacatct tggcaatgca ctgacttatg accctaccaa ctacaaggcc
541 atcttggcag caggcagcat gatgcagacc cacggggact ttgatgttgc cctcaccaaa
601 tacagagttg tggcttgtgc tgttccagaa agtcctccac tctggaataa cattggaatg
661 tgtttctttg gcaagaagaa atatgtggcg gccatcagct gcctgaaacg agccaactac
721 ttggcaccct tcgattggaa gattctgtat aatttgggcc ttgtccattt gaccatgcag
781 cagtatgcat cagcttttca ttttctcagt gcggccatca acttccagcc aaagatgggg
841 gagctctaca tgctcttggc agtggctctg accaatctgg aagatataga aaatgccaag
901 agagcctacg cagaagcagt ccacctggat aagtgtaacc ctttagtaaa cctgaactat
961 gctgtgctgc tgtacaacca gggcgagaag aagaacgccc tggcccaata tcaggagatg
1021 gagaagaaag tcagcctact caaggacaat agctctctgg aatttgactc tgagatggtg
1081 gagatggctc agaagttggg agctgctctc caggttgggg aggcactggt ctggaccaaa
1141 ccagttaaag atcccaaatc aaagcaccag accacttcaa ccagcaaacc tgccagtttc
1201 cagcagcctc tgggctctaa tcaagctcta ggacaggcaa tgtcttcagc agctgcatac
1261 aggacgctcc cctcaggtgc tggaggaaca tcccagttca caaagccccc atctcttcct
1321 ctggagccag agcctgcggt ggaatcaagt ccaactgaaa catcagaaca aataagagag
1381 aaataagaat agaatgaatg accccaaaat agggttttct tgggcgagga tgtgctggat
1441 taggaaaggt gacatgacac aggcagagca gagtggcacc caccacagaa tacagtgtgt
1501 gttattacga ggagccagca gttgagccta aggtccttct acctacctgg tattggcatt
1561 tgaggtcgga aaccctctac tgccccataa gccaggaaaa gtgaaaagag aacacagttc
1621 ctttaagaac tggcagcaag gcttgaggcc ttatgtatgt agctgagtca gcaaggtaca
1681 tgatgctgtc tgctttcaaa aggacttttc tctcctagct gactgactcc ttccttagtt
1741 caaggaacag ctgagacaga cctctgctga gtagctctgt gatgacaaag ccttggttta
1801 actgaggtga tcctcaggtt gtgaggttta ttagtcccca aggcaaacac aaatattaga
1861 ttaataatcc aactttaata gtatacattt aaaaaaaaaa aaaaaaaa
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