LOCUS BC008920 1259 bp mRNA linear HUM 20-DEC-2004
DEFINITION Homo sapiens nicalin homolog (zebrafish), mRNA (cDNA clone
IMAGE:3633567), partial cds.
ACCESSION BC008920
VERSION BC008920.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1259)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1259)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC008920.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: h Column: 11.
FEATURES Location/Qualifiers
source 1..1259
/db_xref="H-InvDB:HIT000087170"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3633567"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1259
/gene="NCLN"
/db_xref="GeneID:56926"
CDS <1..1053
/gene="NCLN"
/codon_start=1
/product="NCLN protein"
/protein_id="AAH08920.2"
/db_xref="GeneID:56926"
/translation="EDLPTIVIVAHYDAFGVAPWLSLGADSNGSGVSVLLELARLFSR
LYTYKRTHAAYNLLFFASGGGKFNYQGTKRWLEDNLDHTDSSLLQDNVAFVLCLDTVG
RGSSLHLHVSKPPREGTLQHAFLRELETVAAHQFPEVRFSMVHKRINLAEDVLAWEHE
RFAIRRLPAFTLSHLESHRDGQRSSIMDVRSRVDSKTLTRNTRIIAEALTRVIYNLTE
KGTPPDMPVFTEQMQIQQEQLDSVMDWLTNQPRAAQLVDKDSTFLSTLEHHLSRYLKD
VKQHHVKADKRDPEFVFYDQLKQVMNAYRVKPAVFDLLLAVGIAAYLGMAYVAVQHFS
LLYKTVQRLLVKAKTQ"
BASE COUNT 298 a 397 c 359 g 205 t
ORIGIN
1 gaggaccttc ccaccatcgt catcgtggcc cactacgacg cctttggagt ggccccctgg
61 ctgtcgctgg gcgcggactc caacgggagc ggcgtctctg tgctgctgga gctggcacgc
121 ctcttctccc ggctctacac ctacaagcgc acgcacgccg cctacaacct cctgttcttt
181 gcgtctggag gaggcaagtt taactaccag ggaaccaagc gctggctgga agacaacctg
241 gaccacacag actccagcct gcttcaggac aatgtggcct tcgtgctgtg cctggacacc
301 gtgggccggg gcagcagcct gcacctgcac gtgtccaagc cgcctcggga gggcaccctg
361 cagcacgcct tcctgcggga gctggagacg gtggccgcgc accagttccc tgaggtacgg
421 ttctccatgg tgcacaagcg gatcaacctg gcggaggacg tgctggcctg ggagcacgag
481 cgcttcgcca tccgccgact gcccgccttc acgctgtccc acctggagag ccaccgtgac
541 ggccagcgca gcagcatcat ggacgtgcgg tcccgggtgg attctaagac cctgacccgt
601 aacacgagga tcattgcaga ggccctgact cgagtcatct acaacctgac agagaagggg
661 acacccccag acatgccggt gttcacagag cagatgcaga tccagcagga gcagctggac
721 tcggtgatgg actggctcac caaccagccg cgggccgcgc agctggtgga caaggacagc
781 accttcctca gcacgctgga gcaccacctg agccgctacc tgaaggacgt gaagcagcac
841 cacgtcaagg ctgacaagcg ggacccagag tttgtcttct acgaccagct gaagcaagtg
901 atgaatgcgt acagagtcaa gccggccgtc tttgacctgc tcctggctgt tggcattgct
961 gcctacctcg gcatggccta cgtggctgtc cagcacttca gcctcctcta caagaccgtc
1021 cagaggctgc tcgtgaaggc caagacacag tgacacagcc acccccacag ccggagcccc
1081 cgccgctcca cagtccctgg ggccgagcac gagtcgtcat gatggatgca ctgactgacc
1141 gtctggggct caggctggtg tgggatgcag ccggccgatg agaaaataaa gccatattga
1201 atgatcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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