LOCUS BC008912 1470 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 3, member A, mRNA
(cDNA clone MGC:15347 IMAGE:3639043), complete cds.
ACCESSION BC008912
VERSION BC008912.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1470)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1470)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC008912.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: d Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13324681.
FEATURES Location/Qualifiers
source 1..1470
/db_xref="H-InvDB:HIT000034072"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15347 IMAGE:3639043"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1470
/gene="FAM3A"
/gene_synonym="2-19"
/gene_synonym="2.19"
/gene_synonym="DXS560S"
/gene_synonym="XAP-7"
/db_xref="GeneID:60343"
/db_xref="HGNC:HGNC:13749"
/db_xref="MIM:300492"
CDS 122..814
/gene="FAM3A"
/gene_synonym="2-19"
/gene_synonym="2.19"
/gene_synonym="DXS560S"
/gene_synonym="XAP-7"
/codon_start=1
/product="family with sequence similarity 3, member A"
/protein_id="AAH08912.1"
/db_xref="GeneID:60343"
/db_xref="HGNC:HGNC:13749"
/db_xref="MIM:300492"
/translation="MRLAGPLRIVVLVVSVGVTWIVVSILLGGPGSGFPRIQQLFTSP
ESSVTAAPRARKYKCGLPQPCPEEHLAFRVVSGAANVIGPKICLEDKMLMSSVKDNVG
RGLNIALVNGVSGELIEARAFDMWAGDVNDLLKFIRPLHEGTLVFVASYDDPATKMNE
ETRKLFSELGSRNAKELAFRDSWVFVGAKGVQNKSPFEQHVKNSKHSNKYEGWPEALE
MEGCIPRRSTAS"
BASE COUNT 296 a 465 c 455 g 254 t
ORIGIN
1 cgcccgcccc cagcaggggt cccgcacagg cttgcccctg acccccaccc aaacctgtcc
61 ttccgctttg cccccaaaca gtgcacttgc cggcggtccc aacccagcag gagaagtgga
121 catgaggttg gcaggccctc tccgcattgt ggtcctagtc gtcagtgtgg gtgtcacatg
181 gatcgtggtc agcatcctcc tgggtgggcc tggcagtggc tttcctcgca tccagcaact
241 cttcaccagt ccagagagct cggtgactgc agcgccacgg gccaggaagt acaagtgtgg
301 cctgccccag ccgtgtcctg aggagcacct ggccttccgc gtggtcagcg gggccgccaa
361 cgtcattggg cccaagatct gcctcgagga caagatgctg atgagcagcg tcaaggacaa
421 cgtgggccgc gggctgaaca tcgccctggt gaacggggtc agcggcgagc tcatcgaggc
481 ccgggccttt gacatgtggg ccggagatgt caacgacctg ttgaagttta ttcggccact
541 gcacgaaggc accctggtgt tcgtggcatc ctacgacgac ccagccacca agatgaatga
601 agagaccaga aagctcttca gtgagctggg cagcaggaac gccaaggagc tggccttccg
661 ggacagctgg gtgtttgtcg gggccaaggg tgtgcagaac aagagcccct ttgagcagca
721 cgtgaagaac agtaagcaca gcaacaagta cgaaggctgg cccgaggcgc tggagatgga
781 aggctgtatc ccgcggagaa gcacggccag ctagcacggc cagtgccagg accgggccga
841 gggaggccag accaagggag gcacgcgcgc tgccgggcgg acagaggctg aggctcacac
901 cccacacccg ggcaggagcg ctccctggcc ccaacacatc ggggctccga ggcagtgacc
961 agaacgtggt ctcaaggtgg tgggggctat gggggctgca gggggtagcc ctgccgcact
1021 ttgtcacggg agcccagggt acccgcctcc ttttcgtaac actgttcccc ccggtcagcc
1081 catctagccc tgtcctccat tcctcacgcc atctccatcc ccatcttgag tcctggaacg
1141 gccctgggtg cctgcccctc actgtgcaac tctgggagca gcccggcagg ttggggcgtc
1201 ttccagaacc tctcccttct ggagccactc tgcactgcgg gctaaacatg tttccagtgt
1261 gattccttcc agtgagccaa acccggtggc tgcttcatga gcctgactgc ctctcgcctg
1321 ctctcagcag gaagggaccc ctggagcagg ctggcccggg gtggtgaagt agctggagcc
1381 cgatcacagt cccgcggttt gtcagggggc ccaccttcta gatgacccct taataaagtg
1441 atggccccac agaaaaaaaa aaaaaaaaaa
//