LOCUS BC008880 1069 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens exosome component 3, mRNA (cDNA clone MGC:15120
IMAGE:4300826), complete cds.
ACCESSION BC008880
VERSION BC008880.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1069)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1069)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC008880.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: o Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50511942.
FEATURES Location/Qualifiers
source 1..1069
/db_xref="H-InvDB:HIT000034047"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15120 IMAGE:4300826"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1069
/gene="EXOSC3"
/gene_synonym="bA3J10.7"
/gene_synonym="CGI-102"
/gene_synonym="hRrp40p"
/gene_synonym="MGC15120"
/gene_synonym="MGC723"
/gene_synonym="p10"
/gene_synonym="RP11-3J10.8"
/gene_synonym="RRP40"
/gene_synonym="Rrp40p"
/db_xref="GeneID:51010"
/db_xref="HGNC:HGNC:17944"
/db_xref="MIM:606489"
CDS 3..830
/gene="EXOSC3"
/gene_synonym="bA3J10.7"
/gene_synonym="CGI-102"
/gene_synonym="hRrp40p"
/gene_synonym="MGC15120"
/gene_synonym="MGC723"
/gene_synonym="p10"
/gene_synonym="RP11-3J10.8"
/gene_synonym="RRP40"
/gene_synonym="Rrp40p"
/codon_start=1
/product="exosome component 3"
/protein_id="AAH08880.1"
/db_xref="GeneID:51010"
/db_xref="HGNC:HGNC:17944"
/db_xref="MIM:606489"
/translation="MAEPASVAAESLAGSRARAARTVLGQVVLPGEELLLPEQEDAEG
PGGAVERPLSLNARACSRVRVVCGPGLRRCGDRLLVTKCGRLRHKEPGSGSGGGVYWV
DSQQKRYVPVKGDHVIGIVTAKSGDIFKVDVGGSEPASLSYLSFEGATKRNRPNVQVG
DLIYGQFVVANKDMEPEMVCIDSCGRANGMGVIGQDGLLFKVTLGLIRKLLAPDCEII
QEVGKLYPLEIVFGMNGRIWVKAKTIQQTLILANILEACEHMTSDQRKQIFSRLAES"
BASE COUNT 297 a 201 c 301 g 270 t
ORIGIN
1 cgatggccga acctgcgtct gtcgcggctg aatctctcgc gggcagcagg gcgcgcgctg
61 cacgcacagt actaggtcag gtggtgctcc cgggtgagga gctgctcctg ccggaacagg
121 aggacgcgga aggccctggg ggtgcagtgg agcgaccgtt gagcctgaat gctagagcgt
181 gctcgcgggt gcgcgttgta tgcggtccgg gccttcggcg ctgtggggac cgcctgctgg
241 tcaccaagtg cggccgcctc cgtcacaagg agcccggcag tggcagcggc ggcggtgttt
301 actgggtgga ctctcagcag aagcggtatg ttccagtaaa aggagaccat gtgattggca
361 tagtgacagc taaatctgga gatatattca aagttgatgt tggagggagt gagccagctt
421 ctttgtctta cttgtcattt gaaggtgcaa ctaaaagaaa cagaccaaat gtgcaggttg
481 gagatctcat ctatggccag tttgtggttg ctaataaaga catggaacca gagatggtct
541 gtattgacag ctgtggacga gccaatggaa tgggtgtcat tggacaggat ggtctgcttt
601 ttaaagtgac tctgggctta attagaaagc tattagctcc agattgtgaa atcatacagg
661 aagtgggaaa actctatcca ctggagatag tatttggaat gaatggaaga atatgggtta
721 aggcaaaaac catccagcag actttaattt tggcaaacat tttagaagct tgtgaacaca
781 tgacgtcaga tcaaagaaaa cagatcttct ccagattggc agaaagttga tataggtgga
841 cttttttaca ggtcagttga ggcaaaaaac tatgggtttt ttcaggtgaa cctcccccat
901 ttaaatactc agaagataag gtgtgaatgt atgtattatt agagtccgaa agtattttta
961 taagttactg gttttcaccc acgcttttgt gggagagaaa atcattgcaa aatcattttt
1021 ttgttcggta caataaagtt tactaaaaaa caaaaaaaaa aaaaaaaaa
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