LOCUS BC008857 2928 bp mRNA linear HUM 23-DEC-2003 DEFINITION Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4, mRNA (cDNA clone IMAGE:4109469), partial cds. ACCESSION BC008857 VERSION BC008857.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2928) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2928) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 19, 2003 this sequence version replaced BC008857.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 26 Row: a Column: 21. FEATURES Location/Qualifiers source 1..2928 /db_xref="H-InvDB:HIT000087164" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4109469" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..2928 /gene="NFATC4" /gene_synonym="NF-ATc4" /gene_synonym="NFAT3" /db_xref="GeneID:4776" /db_xref="MIM:602699" CDS <1..2531 /gene="NFATC4" /gene_synonym="NF-ATc4" /gene_synonym="NFAT3" /codon_start=3 /product="NFATC4 protein" /protein_id="AAH08857.2" /db_xref="GeneID:4776" /db_xref="MIM:602699" /translation="IPRPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGAGG AGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGAQG GGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSPRA SPRPWTPEDPWSLYGPSPGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPS SASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGPFDYVGAPPAESIPQKTRRTSSE QAVALPRSEEPASCNGKLPLGAEESVAPPGGSRKEVAGMDYLAVPSPLAWSKARIGGH SPIFRTSALPPLDWPLPSQYEQLELRIEVQPRAHHRAHYETEGSRGAVKAAPGGHPVV KLLGYSEKPLTLQMFIGTADERNLRPHAFYQVHRITGKMVATASYEAVVSGTKVLEMT LLPENNMAANIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQGGGKVVSV QAASVPIECSQRSAQELPQVEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDG KLQWEEEATVNRLQSNEVTLTLTVPEYSNKRVSRPVQVYFYVSNGRRKRSPTQSFRFL PVICKEEPLPDSSLRGFPSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEGFG YGMPPLYPQTGPPPSYRPGLRMFPETRGTTGCAQPPAVSFLPRPFPSDPYGGRGSSFP LGLPFSPPAPFRPPPLPASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAPEQEK SRGGYSSGFRDSVPIQGITLEEVSEIIGRDLSGFPAPPGEEPPA" misc_feature 1074..1556 /gene="NFATC4" /gene_synonym="NF-ATc4" /gene_synonym="NFAT3" /note="RHD; Region: Rel homology domain (RHD). Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See pfam01833) that binds to DNA" /db_xref="CDD:pfam00554" misc_feature 1575..1853 /gene="NFATC4" /gene_synonym="NF-ATc4" /gene_synonym="NFAT3" /note="IPT; Region: ig-like, plexins, transcription factors" /db_xref="CDD:smart00429" BASE COUNT 572 a 948 c 865 g 543 t ORIGIN 1 gtattccccg acctccaccc cctcggcctg gcatgcattc gccaccgccg cgaccagccc 61 cctcacctgg cacctgggag agccagcccg ccaggtcggt gaggctggga ggaccaggag 121 ggggtgctgg gggtgctggg ggtggccgtg ttctcgagtg tcccagcatc cgcatcacct 181 ccatctctcc cacgccggag ccgccagcag cgctggagga caaccctgat gcctgggggg 241 acggctctcc tagagattac cccccaccag aaggctttgg gggctacaga gaagcagggg 301 cccagggtgg gggggccttc ttcagcccaa gccctggcag cagcagcctg tcctcgtgga 361 gcttcttctc cgatgcctct gacgaggcag ccctgtatgc agcctgcgac gaggtggagt 421 ctgagctaaa tgaggcggcc tcccgctttg gcctgggctc cccgctgccc tcgccccggg 481 cctcccctcg gccatggacc cccgaagatc cctggagcct gtatggtcca agccccggag 541 gccgagggcc agaggatagc tggctactcc tcagtgctcc tgggcccacc ccagcctccc 601 cgcggcctgc ctctccatgt ggcaagcggc gctattccag ctcgggaacc ccatcttcag 661 cctccccagc tctgtcccgc cgtggcagcc tgggggaaga ggggtctgag ccacctccac 721 cacccccatt gcctctggcc cgggacccgg gctcccctgg tccctttgac tatgtggggg 781 ccccaccagc tgagagcatc cctcagaaga cacggcggac ttccagcgag caggcagtgg 841 ctctgcctcg gtctgaggag cctgcctcat gcaatgggaa gctgcccttg ggagcagagg 901 agtctgtggc tcctccagga ggttcccgga aggaggtggc tggcatggac tacctggcag 961 tgccctcccc actcgcttgg tccaaggccc ggattggggg acacagccct atcttcagga 1021 cctctgccct acccccactg gactggcctc tgcccagcca atatgagcag ctggagctga 1081 ggatcgaggt acagcctaga gcccaccacc gggcccacta tgagacagaa ggcagccgtg 1141 gagctgtcaa agctgcccct ggcggtcacc ccgtagtcaa gctcctaggc tacagtgaga 1201 agccactgac cctacagatg ttcatcggca ctgcagatga aaggaacctg cggcctcatg 1261 ccttctatca ggtgcaccgt atcacaggca agatggtggc cacggccagc tatgaagccg 1321 tagtcagtgg caccaaggtg ttggagatga ctctgctgcc tgagaacaac atggcggcca 1381 acattgactg cgcgggaatc ctgaagcttc ggaattcaga cattgagctt cggaagggtg 1441 agacggacat cgggcgcaaa aacacacgtg tacggctggt gttccgggta cacgtgcccc 1501 agggcggcgg gaaggtcgtc tcagtacagg cagcatcggt gcccatcgag tgctcccagc 1561 gctcagccca ggagctgccc caggtggagg cctacagccc cagtgcctgc tctgtgagag 1621 gaggcgagga actggtactg accggctcca acttcctgcc agactccaag gtggtgttca 1681 ttgagagggg tcctgatggg aagctgcaat gggaggagga ggccacagtg aaccgactgc 1741 agagcaacga ggtgacgctg accctgactg tccccgagta cagcaacaag agggtttccc 1801 ggccagtcca ggtctacttt tatgtctcca atgggcggag gaaacgcagt cctacccaga 1861 gtttcaggtt tctgcctgtg atctgcaaag aggagcccct accggactca tctctgcggg 1921 gtttcccttc agcatcggca accccctttg gcactgacat ggacttctca ccacccaggc 1981 ccccctaccc ctcctatccc catgaagacc ctgcttgcga aactccttac ctatcagaag 2041 gcttcggcta tggcatgccc cctctgtacc cccagacggg gcccccacca tcctacagac 2101 cgggcctgcg gatgttccct gagactaggg gtaccacagg ttgtgcccaa ccacctgcag 2161 tttccttcct tccccgcccc ttccctagtg acccgtatgg agggcggggc tcctctttcc 2221 ccctggggct gccattctct ccgccagccc cctttcggcc gcctcctctt cctgcatccc 2281 caccgcttga aggccccttc ccttcccaga gtgatgtgca tcccctacct gctgagggat 2341 acaataaggt agggccaggc tatggccctg gggagggggc tccggagcag gagaaatcca 2401 ggggtggcta cagcagcggc ttccgagaca gtgtccctat ccagggtatc acgctggagg 2461 aagtgagtga gatcattggc cgagacctga gtggcttccc tgcacctcct ggagaagagc 2521 ctcctgcctg aaccacgtga actgtcatca cctggcaacc ccagccccag cctcagccct 2581 gccccctttc cctccttcct ggagtggtgg ctacagaagc ttggggccaa ccctggctcc 2641 tctttcccca gcttctgtct gtctcactgt cttccctccc ctcccccagc tgaggtgtgg 2701 ccctcaggcc tggtgctgcc ttggagggct gggggaagga gtgtgtggag gagggaggag 2761 ggtgaagact gaggctaggt gccagaatgg actggagtga aggcgtgtct agagtgtggg 2821 ctggctgttg tgctggaaag ctggggacag gttgatggta ataaactgct caatgaccag 2881 taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa //