LOCUS BC008839 1880 bp mRNA linear HUM 31-AUG-2004
DEFINITION Homo sapiens PKD2 interactor, golgi and endoplasmic reticulum
associated 1, mRNA (cDNA clone IMAGE:4120338).
ACCESSION BC008839
VERSION BC008839.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1880)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1880)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008839.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: c Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1880
/db_xref="H-InvDB:HIT000087161"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4120338"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 481 a 491 c 409 g 499 t
ORIGIN
1 cacggaggaa aggccccctg ccacttctct gatgctgctg gcctcctcga tgggaaaccc
61 tctgtaactg ggtagaatgc aacccctgat gacccaggac cacaagtact tgaagaatat
121 tcacagtcca ctctgtcagc acgctgtcac ccacgagggc atggcactcc ctgcacgaag
181 gagagcaggt ctcagaggac gtcaaaggca gatactggtg attgtaaggc taagggatta
241 gagctgaaat tgattctaag ctgtagctcc cataatgggg atgaggggaa aaaatgctgg
301 aaatagaatg ccactttcct ccttagggtt tttttgtttt tgttttttgg tttgtttgtt
361 ttctgagaca cggtctcgct ctgtcggcca ggctgggtgc ttttcttgta ctaactcact
421 atgaggtaga tactacgatt atgctcattt ttaaaaaaaa acatccaggc cgggcgtggt
481 ggctcatgcc tgtgatccca aaatgctaag attacaggca tgagccatca tgcccagcct
541 agtccttttt aaaaaaaaaa aaaaagatgg catcttactt tgcagccaag gctgctctca
601 aactcctgag gttaagccat cctcctgtct tagcctccca agtagctggg actacagggg
661 tgcaccacca caattagcta ttatgccatt tattgctgaa gaaattaagt tacagagcag
721 ttagtcagta gcagagctgg gtgaggaacc caggccattt tgctctggag tgtgtgctct
781 taaccactac agtgtatgct ctcctgcctc tgaaccttca caggctcctc taggcccagt
841 gggttgctgg atttttaaca gccacaagaa accaacacta atgcagtgtg agcccctcag
901 ctggtctgta ctgggcactg attaatgcct acttggtatg agacacttcc aagccatgag
961 ccggctctac ccctcttcct ggaatgcctt catctaacct ccattcctgc cattatcctt
1021 ccacattcag ctcagatatc ccttcctctg ggaagctctc ccgacttgac agaaataact
1081 tctccctcgt gtgctgtgca gatcctgtgc agactccaac tgggtcctta tgtaattatg
1141 cttacggtcg gtccacctgc ctctacactg tgagggcagg aactgtgtct tgtttcttgc
1201 gtgtggcttt ggatgcaaag caacgtacct ggccaaactg gcattgagga gatatctgtt
1261 ggattaagtg actcgaggtg gagcctcccc aaaaggagaa gctaggcctc tcttccccat
1321 cacctgcctc accatgtcta ataagatgtc cactttcagc cgcaagagat tgttctcttc
1381 ctccaactgc tggttccgcc tgcgaaggcg ctgaacctcc ctccggtcca caccgccact
1441 aacccctgtc tctggaggaa ggacagaacc agttaaaggg ggatttcctc ctacaatctt
1501 gtttgacaaa atggcaggaa gtgcagctca cctgctatcc actggccatt ttcaaacttc
1561 aggctttgcc ctgccaggtt catagtcggg gatccgtatt ccaagcccag ctccacctcc
1621 cgggttgatc gatccaactg tgggcgagat gctatgtgac aacttcagca ggcccggaac
1681 acgccttcat cccagctcct cttccaccaa caatatgacc ccaacaactc atttctctaa
1741 tcattacttg gcacctttaa tgattttttt aaagccataa aatcaaatga tgtacaggaa
1801 aagtttaatt gtgagataaa aaatatactg ttttatacat tagatgtttt ccagaaaagc
1861 taaaaaaaaa aaaaaaaaaa
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