LOCUS BC008828 2941 bp mRNA linear HUM 24-JUL-2006
DEFINITION Homo sapiens zinc finger and BTB domain containing 43, mRNA (cDNA
clone MGC:12781 IMAGE:4123095), complete cds.
ACCESSION BC008828
VERSION BC008828.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2941)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2941)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC008828.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: f Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45267833.
FEATURES Location/Qualifiers
source 1..2941
/db_xref="H-InvDB:HIT000034002"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12781 IMAGE:4123095"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2941
/gene="ZBTB43"
/gene_synonym="ZBTB22B"
/gene_synonym="ZNF-X"
/db_xref="GeneID:23099"
/db_xref="HGNC:HGNC:17908"
CDS 198..1601
/gene="ZBTB43"
/gene_synonym="ZBTB22B"
/gene_synonym="ZNF-X"
/codon_start=1
/product="zinc finger and BTB domain containing 43"
/protein_id="AAH08828.1"
/db_xref="GeneID:23099"
/db_xref="HGNC:HGNC:17908"
/translation="MEPGTNSFRVEFPDFSSTILQKLNQQRQQGQLCDVSIVVQGHIF
RAHKAVLAASSPYFCDQVLLKNSRRIVLPDVMNPRVFENILLSSYTGRLVMPAPEIVS
YLTAASFLQMWHVVDKCTEVLEGNPTVLCQKLNHGSDHQSPSSSSYNGLVESFELGSG
GHTDFPKAQELRDGENEEESTKDELSSQLTEHEYLPSNSSTEHDRLSTEMASQDGEEG
ASDSAEFHYTRPMYSKPSIMAHKRWIHVKPERLEQACEGMDVHATYDEHQVTESINTV
QTEHTVQPSGVEEDFHIGEKKVEAEFDEQADESNYDEQVDFYGSSMEEFSGERSDGNL
IGHRQEAALAAGYSENIEMVTGIKEEASHLGFSATDKLYPCQCGKSFTHKSQRDRHMS
MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSC
TKSYEAAKAEQNTTEAN"
BASE COUNT 868 a 609 c 729 g 735 t
ORIGIN
1 cggcagagag gatatcttgg gcgggggatg tgagcgctga gcccttggca gaagtcaatg
61 tgattttaat ttgaagcaaa actgaaatgg gttcttcttc ctcattctat tcatgttgct
121 ttttgatggc catggcataa ggaactctat cccaggaata cagctttgca ttagcaccga
181 acaagatttg tgatgaaatg gagcctggaa caaactcttt tcgggtagaa tttcctgatt
241 tttccagcac cattctacag aaactgaacc agcagcgcca gcaaggacaa ttatgtgacg
301 tctccattgt tgtccaaggc cacattttcc gggcacacaa agccgttctt gctgccagtt
361 caccctactt ttgtgaccag gtactcctga aaaacagcag gagaattgtt ttgcctgatg
421 tgatgaaccc aagagtgttt gagaacattc tcctatctag ttatacagga cgtctagtaa
481 tgcccgctcc agaaattgtt agttacttga cagcggcaag cttcctccag atgtggcatg
541 tggtagacaa atgcactgaa gttttagagg gaaaccctac agtcctttgt cagaagctaa
601 atcatggcag tgaccaccag tcaccaagca gcagtagtta taatggcctg gtagagagct
661 ttgagctggg ctctgggggt catactgatt ttcccaaagc ccaagaactg agagatggtg
721 aaaatgaaga ggagagcacc aaagacgagc tgtcatccca gctcaccgag cacgaatacc
781 tgcccagcaa ctcgtccaca gagcatgacc gcctgagcac ggaaatggca agccaggatg
841 gggaggaggg cgccagcgac agcgccgagt tccactacac ccggcccatg tacagcaagc
901 ccagcatcat ggctcacaaa cgctggatcc acgtgaagcc cgagcgctta gaacaggctt
961 gcgagggcat ggatgtgcac gcgacctacg acgagcacca ggtcacagag tccatcaaca
1021 ccgtgcagac agagcacacg gtgcagcctt cgggagtgga ggaggacttc cacatcgggg
1081 agaagaaagt ggaagctgag tttgatgaac aggctgatga aagcaattat gatgagcagg
1141 tggatttcta tggctcttcc atggaagagt tttccggaga gaggtcagat gggaatctaa
1201 ttgggcacag acaggaggct gccctcgcag caggttacag tgagaatatt gaaatggtaa
1261 cagggattaa agaagaagct tcccacttag gattctcagc caccgacaag ctgtatcctt
1321 gtcagtgtgg gaaaagtttc actcacaaga gtcagagaga tcggcacatg agcatgcacc
1381 tcggtcttcg gccttacggc tgtggggtct gcggtaagaa attcaaaatg aagcaccatc
1441 tcgtgggcca catgaaaatt cacacaggca taaagccgta tgagtgtaat atctgtgcaa
1501 agaggtttat gtggagggac agtttccacc ggcatgtgac ttcttgtact aagtcctacg
1561 aagctgcaaa ggctgagcag aatacaactg aggctaacta aaaataggat ctggcccttg
1621 agtggcatgc acaaaaataa actatggtaa ttaatgcaaa tctgggcaca gatgatgcgt
1681 gctacttgct attatgagag aagcttaaaa aaaaaaagga agatatttct gaaagaccag
1741 ctaagtaggc caattaaaaa aatctaattc ctcaaatttg tgtgttccag tcctggcctg
1801 gaatgggtaa tggggtgagt taacccaccg cccagctggc aagggaaacc ttctgactgg
1861 ttgtgatcga aacaggtgga cagagacacc tgcacttgga actggactcc acccaccagt
1921 tccattttgg gtggcagcag ctttggatca ctcattatta caaggtcatg ctgaaatttt
1981 attttgctct tgctatagat acttaggtaa tgtggatttg ttttggtagc tatttcactg
2041 aaggaagtgc tacttatata aaagctagaa ataatgtgat tcctaggatg agaaattggt
2101 taacagagct ctgttgtctg gttttagtct ttctaaagga tattttaact aaaactatgg
2161 agatgctaag agagtgactt tctaaatatg aaacagataa tttacggtac aaggctgaca
2221 tagtgccctt gtcagtttct gtaagatgcc actactgtca caaggtgttt cagactcttg
2281 ataaggcagt gttttgtatt ttagttctaa cattgagttt ggacaatttt atctaattgt
2341 aattctctag ggtgccagag ataggtattt ctcattggtt tgctttccca aatcctgttt
2401 ggttaattgt agcctccata cagtggggtc ttctctgtgg ctggtagaca ccaagctgct
2461 gtgactgacc acggtaccac gggctgccac agcccctgct ctgtcttaga ttatggtgct
2521 ttacaaagag agtggtccat gaccacactt agtgagaagg agccacaagt tgtggctgag
2581 agttccctgt gaacttgagt agttcataga gtgctaaggt gacactccac caaccagagt
2641 gagagggcag ataggcagga ttctatgagt ggttatactt aagggggaca aaactgccca
2701 agaagaatct tgagaataca ctctttcaag gtgggggaga tactctttag agggtacact
2761 gagctaatac taccagttct ttatgagcac tggaatgtgt ttgtaaaagg agtcctaagt
2821 ttagcaaggt agtctacaga accatgctcc cacattatag ataaagctgc ttaaacttaa
2881 aagtccacaa agctacgccg accaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2941 a
//