LOCUS BC008824 5165 bp mRNA linear HUM 24-MAR-2004
DEFINITION Homo sapiens cDNA clone IMAGE:4109512, partial cds.
ACCESSION BC008824
VERSION BC008824.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5165)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5165)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: d Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..5165
/db_xref="H-InvDB:HIT000258926"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4109512"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 1277 a 1440 c 1170 g 1278 t
ORIGIN
1 ggcacgaggc tctctgcaga gcccaggcta ccagagcacc tgtccctcgg ccgcctggta
61 cagctcccac tctcagcagg tgacactcgc ggcctggaag gagaaggtgt ccacggagcc
121 cccacccatc ctcggcggtt cccatcacca ctgcagttcc atcccaagtc acagctgccc
181 taggtcccgt gtgggaatgc tcgtgtgatg gatggtccta agcctgtgga gactgtgcac
241 gtgcctcttc ctggccccca gcaggcaagg aggggggtca caggccttgc cctcgagcat
301 ggcaccctgg ccgcctggac ccagcactgt ggttgttgag ccacaccagt ggcctctggg
361 cattcggctc aacgcaggag ggacattctg ctggcccacc ctgcgcgctg tcatgcagag
421 gccattcctc caggcctgtg tcttcaccca cctgccgtca ttggcctttg ctgtcactgg
481 gagagaagag ccgtccaggg acccatggtg gcccacatgt ggatgccaca tgctgctgtt
541 tcctgcttgc ccggccacca cccatgccct ccatagggtg aggtggagcc atggtggtgc
601 gtcctttact caacaaccct ccaatccgga tgctgtggga agggccgggt cactcggata
661 ccatcatccc tgcggatgca ccgccgtacc ctgctcatct gggagtggtt tccctgcggt
721 tacgtccaag cccgcctgcc ctgtgtgttg gggctggctg agtttcggtc tccccatcac
781 cggccgcctc gtggagaagg cagtgccacg tgggaggaca aggccacgcc ggcagcttcc
841 agccctgccg cagaagtgcc aggatgtcca tcagccactc gccagggcac ggagccgtca
901 gtccactgtt acgggagaat gttgatttcg cgggtgcgag ggccgggaga cagatacttg
961 gctgtgatga gcagacatcc tctgtccccg tggaggggtc aacaccaagg tggtgttcgt
1021 gcaccagaac ctgtctcggg ctgacggggg tggcacacag gacacgggtg gatcccaaca
1081 ggcagcaccg cacctccgcc cgcctcccgc actgcagctc cgcccgccgg gctctgcgtc
1141 tccacgtccc ctcgtcccat ccccacgtcc cctcatcccg tcacctcgtc cccacatccc
1201 cttgccccgt cacctcgtcc tcatgtcccc ttgtcctgtc acctcgtccc cacgtcccct
1261 cgtctcatcc ccacgtcctc tcgtcccctt gtcccgtccc cacataccct cgtccccatg
1321 tccccacgca gggctctcct tcgtcttagg atctgtccag cgctgctctg ggtgggttag
1381 caaccccagg gctgctgtga taggaagtcc ctgttgttct ccgtactggc atttctattt
1441 ctagaaataa tatttgacat agccttaatg gtccttaaag aagacatttc agtgtgagat
1501 tcagacttca gacgctgaaa ctgctgcctt tcaggaaagc accaccaacg ctggaggagg
1561 agccggccct cacgcccgcc ccgcgccacg ctgtggaacg gggctccggc aagtgaaacc
1621 cagagggtgt ttccgaggtg ctcgacagta ggtatttttg gaagctcaga tttcaccatt
1681 tgattgtata atcttttacc tataaaatat ttatttgaag tagagggtaa atcagcggta
1741 agaacagtga acacagtggt tgggataaaa taaggtgaca aacatcacac caaagatgag
1801 ggtagcgagc aactggcttg agcagacaga acggggaaga ctccactctg tcccgagggg
1861 ccagccgcag gcgtccccag ggccaccctg ccctgaggtc cttgtgtggc cgccctggct
1921 tggcagccct gcccacgctg cccccgcaaa caatggtgtg tgcgttttta cagccctttt
1981 taggaaccca atatgggcat aaatgtaaca cctgtagcgg gggcagattc tctgtatgtt
2041 cagttaacaa attatttgta atgtattttt ttagaaatct taaaattgcc tttgcactga
2101 agtattttca tagctgttta tatctctttt attcatttat ttaacatact gtctaatttt
2161 aaaaataggt ttttaaagct ttcattttta agtttatgaa attttggcca ctttacattt
2221 agattctggt gagagttttg actgaatgtt ccaatctctg atgaatgcga attttcagat
2281 ttgattttat tctctacaca cacctcttct tttcttggta tttctggtgg cagtgattag
2341 ttgaacagca catttaaggc acgataattt gctacacttt ttctttacaa tttgttgcaa
2401 tttcatctgc tttctatgtt tcattgttaa ttgccatcct tcagccttaa aaatagaaga
2461 ttctcacgtg aaggtttagt aagttgggtc ccagctctgc ctgtgtggag atagtcacca
2521 tgtacctctg acaacaagtt ttagtgtgaa agtcactaaa cttttacaca ctcccaaacg
2581 tctttttaaa aattgcttgg gaaattatta aatgaatgtg cctgatgatt tgaaatagac
2641 aaggggcacg agataaaaaa gaaaaggatg agaagatcct cagtgaatga cgttgcaggg
2701 tcttcatgca attttccacc tcgcagtagt tagtatttac ttgccttaaa ctaactttga
2761 agcaagtaat gtcaactttg agcactttgt tgagttttga aaaatcttat ttgttgctgc
2821 acaggttaat aaattatcaa tttgtaattc agcatgttgg tcagagacac ggtcactgat
2881 tcacacccag tccctgccac agaccgtctc agacacgcac agtgggcctg ctgcatgatt
2941 cacacccagt ccctgccaca gaccgtctca gacacgcaca gtgggcctgc tgcatgattc
3001 acacccagtc cctgccacag accgtctcag acacgcacag tgggcctgct gcatgcgtgt
3061 tacctggctt ttggctccac gctcactcat agccatgtcc acatgggggc ttgcacacag
3121 gatcactcac atatgtacat gtacccacca caaacgtgca agctcctgca cacatgcatg
3181 cacacaaacg tgtacacaag tgtgagctcc tacacgcata cacacacaca cgtgtacatg
3241 caccaaagca tgtgtgacct acagacatgc agaacatgca cgtgtacaca taccacagac
3301 acgcgtgtgc atgctcctac acaatacata tgcacatatc atgaacagca taagttccta
3361 cacacggacg tgtgatacac acatgcatgt acaggtaagc acacatgtac aagctcctac
3421 aggcttgctc tcacacacgt gtatgcacag cagagagacg tatgagcttc tactgcacac
3481 atgcacacac acacgcacac gtacattcac tacaaacgtg cagcctcctg cacacgtgca
3541 cattcatgtg tacaccacaa atgagttccc agacgtgtaa acacacgtgc acacatcgta
3601 cacatgtgag ctcccacacg tacacacaga tgcacatgga cacaccccaa acacgcacag
3661 gctcctacac acatgcacac acgtgtacac cacaaacgag ctcccagaca tgtaaacaca
3721 tgtctcccac acgtgagctc ccacacatgt acacatgcac atgtacgcac cacaaacaca
3781 tgcgcaggct cctgcaggcg tgaatacaca catgcacaca catatacaca cacgtgccac
3841 aaacaagtgc acactgtcct ggtgtcctgc actgcatcct gcctccttgc tgaggggccc
3901 ctgtgagagg cctctggatg ggcatgggaa gatgggctcc ctggccccca gcccatgcct
3961 ccctgggatg aagagtcccc ctcctggcag aatgtctggg ctttgcagag caggccccgg
4021 gggtgaagtc gcagcttcac ttacaccagc tgctctgtga gcaaggcttg gtgccctgga
4081 caaggccctt cccctttagg gaggtccagc ctcgcaagct gaaacctccc ctcggctcag
4141 ccctatacca ggcggccaca gcaggactgg ccacacccac gccgcacctc atccgtgcac
4201 gcgtcggagc acggccagcc ttccgccacg agccagctgg gaagggccgc ggccgcctaa
4261 agccccagtc aacccagcct gtgtctgagc agacagggcg aacaagcagg ccacaccgtc
4321 tcgagggagg aggccagatg cggccagcgt ctccaacagg gtgaccatcc gctcggcttg
4381 ctgagcgttt aaacaaatgt ttagacaggc tgtggggact cccctgagtt gagccttggc
4441 caggggtccg gtgctgtcgc gggaaacctc cagccttgtt cttcaaacca ctcagctcat
4501 gtgttttgca ctgactagta ctgaataata caaccactct tatttaatgt tagtattatt
4561 tatttgacaa ctcagtgtct aacagcttga tatgcaggtc cttgcatcct acatttcttt
4621 aggaagttac ccatttgtaa ctttaaaaac aggaaaaata tcagttggca aatgcaatct
4681 tttttttttt taagctaaag gtgggtgaac tggaatgaaa atctttctga tgttgtgtct
4741 ataagcagcc ttgatgggat atgttagaag tgtcatgaaa gtgtgattct acttttgcag
4801 aaaaatctaa agatcaattt atatagcttt attttttact ttatcaaagt atacagaatt
4861 ttaatatgca tatattgtgt ctgacttaaa attataatgt ctgcgtcacc atttaaaatg
4921 tctgttcatt atgtaatgta ataaaagaag gtcttcaaaa atgtatttaa catgaatggt
4981 atccatagtt gtcatcatca taaatactgg agtttatttt taaattatta aacatagtag
5041 gtgcattaac ataaatcagt ctccacacag taacatttaa ctgataattc attaatcagc
5101 tttgaaaaat taaattgtta attaaaccaa tctaacattt caaaaaaaaa aaaaaaaaaa
5161 aaaaa
//