LOCUS       BC008819                1515 bp    mRNA    linear   HUM 01-SEP-2006
DEFINITION  Homo sapiens nuclear receptor subfamily 1, group H, member 3, mRNA
            (cDNA clone MGC:10474 IMAGE:3957848), complete cds.
ACCESSION   BC008819
VERSION     BC008819.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1515)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAY-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 19, 2003 this sequence version replaced BC008819.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 15 Row: f Column: 6
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 5031892.
FEATURES             Location/Qualifiers
     source          1..1515
                     /db_xref="H-InvDB:HIT000033995"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:10474 IMAGE:3957848"
                     /tissue_type="Placenta, choriocarcinoma"
                     /clone_lib="NIH_MGC_21"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1515
                     /gene="NR1H3"
                     /gene_synonym="LXR-a"
                     /gene_synonym="LXRA"
                     /gene_synonym="RLD-1"
                     /db_xref="GeneID:10062"
                     /db_xref="HGNC:HGNC:7966"
                     /db_xref="MIM:602423"
     CDS             170..1333
                     /gene="NR1H3"
                     /gene_synonym="LXR-a"
                     /gene_synonym="LXRA"
                     /gene_synonym="RLD-1"
                     /codon_start=1
                     /product="NR1H3 protein"
                     /protein_id="AAH08819.1"
                     /db_xref="GeneID:10062"
                     /db_xref="HGNC:HGNC:7966"
                     /db_xref="MIM:602423"
                     /translation="MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEA
                     RMPHSAGGTAGVGLEAAEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCG
                     DKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQ
                     AGMREECVLSEEQIRLKKLKRQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLV
                     AAQQQCNRRSFSDRLRVTVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFI
                     NPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVS
                     IHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE"
BASE COUNT          366 a          438 c          427 g          284 t
ORIGIN      
        1 cctgcttgtg ctcagctcca gctcactggc tggccaccga gacttctgga caggaaactg
       61 caccatcctc ttctcccagc aagggggctc cagagactgc ccacccagga agtctggtgg
      121 cctggggatt tggacagtgc cttggtaatg accagggctc caggaagaga tgtccttgtg
      181 gctgggggcc cctgtgcctg acattcctcc tgactctgcg gtggagctgt ggaagccagg
      241 cgcacaggat gcaagcagcc aggcccaggg aggcagcagc tgcatcctca gagaggaagc
      301 caggatgccc cactctgctg ggggtactgc aggggtgggg ctggaggctg cagagcccac
      361 agccctgctc accagggcag agcccccttc agaacccaca gagatccgtc cacaaaagcg
      421 gaaaaagggg ccagccccca aaatgctggg gaacgagcta tgcagcgtgt gtggggacaa
      481 ggcctcgggc ttccactaca atgttctgag ctgcgagggc tgcaagggat tcttccgccg
      541 cagcgtcatc aagggagcgc actacatctg ccacagtggc ggccactgcc ccatggacac
      601 ctacatgcgt cgcaagtgcc aggagtgtcg gcttcgcaaa tgccgtcagg ctggcatgcg
      661 ggaggagtgt gtcctgtcag aagaacagat ccgcctgaag aaactgaagc ggcaagagga
      721 ggaacaggct catgccacat ccttgccccc cagggcttcc tcaccccccc aaatcctgcc
      781 ccagctcagc ccggaacaac tgggcatgat cgagaagctc gtcgctgccc agcaacagtg
      841 taaccggcgc tccttttctg accggcttcg agtcacggtg atgcttctgg agacatctcg
      901 gaggtacaac cctgggagtg agagtatcac cttcctcaag gatttcagtt ataaccggga
      961 agactttgcc aaagcagggc tgcaagtgga attcatcaac cccatcttcg agttctccag
     1021 ggccatgaat gagctgcaac tcaatgatgc cgagtttgcc ttgctcattg ctatcagcat
     1081 cttctctgca gaccggccca acgtgcagga ccagctccag gtagagaggc tgcagcacac
     1141 atatgtggaa gccctgcatg cctacgtctc catccaccat ccccatgacc gactgatgtt
     1201 cccacggatg ctaatgaaac tggtgagcct ccggaccctg agcagcgtcc actcagagca
     1261 agtgtttgca ctgcgtctgc aggacaaaaa gctcccaccg ctgctctctg agatctggga
     1321 tgtgcacgaa tgactgttct gtccccatat tttctgtttt cttggccgga tggctgaggc
     1381 ctggtggctg cctcctagaa gtggaacaga ctgagaaggg caaacattcc tgggagctgg
     1441 gcaaggagat cctcccgtgg cattaaaaga gagtcaaagg aaaaaaaaaa aaaaaaaaaa
     1501 aaaaaaaaaa aaaaa
//