LOCUS BC008819 1515 bp mRNA linear HUM 01-SEP-2006 DEFINITION Homo sapiens nuclear receptor subfamily 1, group H, member 3, mRNA (cDNA clone MGC:10474 IMAGE:3957848), complete cds. ACCESSION BC008819 VERSION BC008819.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1515) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1515) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC008819.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 15 Row: f Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5031892. FEATURES Location/Qualifiers source 1..1515 /db_xref="H-InvDB:HIT000033995" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10474 IMAGE:3957848" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1515 /gene="NR1H3" /gene_synonym="LXR-a" /gene_synonym="LXRA" /gene_synonym="RLD-1" /db_xref="GeneID:10062" /db_xref="HGNC:HGNC:7966" /db_xref="MIM:602423" CDS 170..1333 /gene="NR1H3" /gene_synonym="LXR-a" /gene_synonym="LXRA" /gene_synonym="RLD-1" /codon_start=1 /product="NR1H3 protein" /protein_id="AAH08819.1" /db_xref="GeneID:10062" /db_xref="HGNC:HGNC:7966" /db_xref="MIM:602423" /translation="MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEA RMPHSAGGTAGVGLEAAEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCG DKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQ AGMREECVLSEEQIRLKKLKRQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLV AAQQQCNRRSFSDRLRVTVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFI NPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVS IHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE" BASE COUNT 366 a 438 c 427 g 284 t ORIGIN 1 cctgcttgtg ctcagctcca gctcactggc tggccaccga gacttctgga caggaaactg 61 caccatcctc ttctcccagc aagggggctc cagagactgc ccacccagga agtctggtgg 121 cctggggatt tggacagtgc cttggtaatg accagggctc caggaagaga tgtccttgtg 181 gctgggggcc cctgtgcctg acattcctcc tgactctgcg gtggagctgt ggaagccagg 241 cgcacaggat gcaagcagcc aggcccaggg aggcagcagc tgcatcctca gagaggaagc 301 caggatgccc cactctgctg ggggtactgc aggggtgggg ctggaggctg cagagcccac 361 agccctgctc accagggcag agcccccttc agaacccaca gagatccgtc cacaaaagcg 421 gaaaaagggg ccagccccca aaatgctggg gaacgagcta tgcagcgtgt gtggggacaa 481 ggcctcgggc ttccactaca atgttctgag ctgcgagggc tgcaagggat tcttccgccg 541 cagcgtcatc aagggagcgc actacatctg ccacagtggc ggccactgcc ccatggacac 601 ctacatgcgt cgcaagtgcc aggagtgtcg gcttcgcaaa tgccgtcagg ctggcatgcg 661 ggaggagtgt gtcctgtcag aagaacagat ccgcctgaag aaactgaagc ggcaagagga 721 ggaacaggct catgccacat ccttgccccc cagggcttcc tcaccccccc aaatcctgcc 781 ccagctcagc ccggaacaac tgggcatgat cgagaagctc gtcgctgccc agcaacagtg 841 taaccggcgc tccttttctg accggcttcg agtcacggtg atgcttctgg agacatctcg 901 gaggtacaac cctgggagtg agagtatcac cttcctcaag gatttcagtt ataaccggga 961 agactttgcc aaagcagggc tgcaagtgga attcatcaac cccatcttcg agttctccag 1021 ggccatgaat gagctgcaac tcaatgatgc cgagtttgcc ttgctcattg ctatcagcat 1081 cttctctgca gaccggccca acgtgcagga ccagctccag gtagagaggc tgcagcacac 1141 atatgtggaa gccctgcatg cctacgtctc catccaccat ccccatgacc gactgatgtt 1201 cccacggatg ctaatgaaac tggtgagcct ccggaccctg agcagcgtcc actcagagca 1261 agtgtttgca ctgcgtctgc aggacaaaaa gctcccaccg ctgctctctg agatctggga 1321 tgtgcacgaa tgactgttct gtccccatat tttctgtttt cttggccgga tggctgaggc 1381 ctggtggctg cctcctagaa gtggaacaga ctgagaaggg caaacattcc tgggagctgg 1441 gcaaggagat cctcccgtgg cattaaaaga gagtcaaagg aaaaaaaaaa aaaaaaaaaa 1501 aaaaaaaaaa aaaaa //