LOCUS BC008816 2966 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chemokine binding protein 2, mRNA (cDNA clone
MGC:10537 IMAGE:3959017), complete cds.
ACCESSION BC008816
VERSION BC008816.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2966)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2966)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC008816.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: b Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37577160.
FEATURES Location/Qualifiers
source 1..2966
/db_xref="H-InvDB:HIT000033992"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10537 IMAGE:3959017"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2966
/gene="CCBP2"
/gene_synonym="CCR10"
/gene_synonym="CCR9"
/gene_synonym="D6"
/gene_synonym="hD6"
/db_xref="GeneID:1238"
/db_xref="HGNC:HGNC:1565"
/db_xref="MIM:602648"
CDS 168..1322
/gene="CCBP2"
/gene_synonym="CCR10"
/gene_synonym="CCR9"
/gene_synonym="D6"
/gene_synonym="hD6"
/codon_start=1
/product="chemokine binding protein 2"
/protein_id="AAH08816.1"
/db_xref="GeneID:1238"
/db_xref="HGNC:HGNC:1565"
/db_xref="MIM:602648"
/translation="MAATASPQPLATEDADSENSSFYYYDYLDEVAFMLCRKDAVVSF
GKVFLPVFYSLIFVLGLSGNLLLLMVLLRYVPRRRMVEIYLLNLAISNLLFLVTLPFW
GISVAWHWVFGSFLCKMVSTLYTINFYSGIFFISCMSLDKYLEIVHAQPYHRLRTRAK
SLLLATIVWAVSLAVSIPDMVFVQTHENPKGVWNCHADFGGHGTIWKLFLRFQQNLLG
FLLPLLAMIFFYSRIGCVLVRLRPAGQGRALKIAAALVVAFFVLWFPYNLTLFLHTLL
DLQVFGNCEVSQHLDYALQVTESIAFLHCCFSPILYAFSSHRFRQYLKAFLAAVLGWH
LAPGTAQASLSSCSESSILTAQEEMTGMNDLGERQSENYPNKEDVGNKSA"
BASE COUNT 629 a 829 c 656 g 852 t
ORIGIN
1 ggatcctttc tggaatggag gtcttatgag ctgctattga acacggcaga gcctgttggt
61 gacctgcaca caggagccct ccagtcagta ctgattgaat tactcaaggc tgcctctctg
121 caaagttgag cactacagga cgtcgggact gggcatttcc ttccaacatg gccgccactg
181 cctctccgca gccactcgcc actgaggatg ccgattctga gaatagcagc ttctattact
241 atgactacct ggatgaagtg gccttcatgc tctgcaggaa ggatgcagtg gtgtcctttg
301 gcaaagtctt cctcccagtc ttctatagcc tgatttttgt gttgggcctc agcgggaacc
361 tccttcttct catggtcttg ctccgttacg tgcctcgcag gcggatggtt gagatctatc
421 tgctgaatct ggccatctcc aaccttctgt ttctggtgac actgcccttc tggggcatct
481 ccgtggcctg gcattgggtc ttcgggagtt tcttgtgcaa gatggtgagc actctttata
541 ctattaactt ttacagtggc atctttttca ttagctgcat gagcctggac aagtacctgg
601 agatcgttca tgctcagccc taccacaggc tgaggacccg ggccaagagc ctgctccttg
661 ctaccatagt atgggctgtg tccctggccg tctccatccc tgatatggtc tttgtacaga
721 cacatgaaaa tcccaagggt gtgtggaact gccacgcaga tttcggcggg catgggacca
781 tttggaagct cttcctccgc ttccagcaga acctcctagg gtttctcctt ccactccttg
841 ccatgatctt cttctactcc cgtattggtt gtgtcttggt gaggctgagg cccgcaggcc
901 agggccgggc tttaaaaata gctgcagcct tggtggtggc cttcttcgtg ctatggttcc
961 catacaatct caccttgttt ctgcatacgc tgttggacct gcaagtattc gggaactgtg
1021 aggtcagcca gcatctagac tacgcactcc aggtaacaga gagcatcgcc ttccttcact
1081 gctgcttttc ccccatcctg tatgccttct ccagtcaccg cttccgccag tacctgaagg
1141 ctttcctggc tgccgtgctt ggatggcacc tggcacctgg cactgcccag gcctcattat
1201 ccagctgttc tgagagcagc atacttactg cccaagagga aatgactggc atgaatgacc
1261 ttggagagag gcagtctgag aactacccta acaaggagga tgtggggaat aaatcagcct
1321 gagtgaccaa attttggtct ggtgggaaca gatgggaacc agctcaattg ggtgtccact
1381 caaagtgctc tctccagggg cctcagtgac tgtgttgcta aacccagtgg tcagttctca
1441 gttctcagcc atcagcagca tttgctcgcc ccgccttctt cctccacttt cttcacttgc
1501 ttccaggata ccacgctttc ttttctgaat tgctacaatc tttcttcctt ccttccttgc
1561 ttccttcctt ccttccttcc ctctctccct ccctccctcc ctcgcttctt cccttcctcc
1621 tttcctccct tcctactttc cttccttcct tctgacaggg tcttgctcta ttgctctgtc
1681 acccaggctg gaatgcagtg gcgagatctc cgctcactgt agcctcctcc ccctgggttg
1741 aagcaattct catgcctcag cctcccaagt agccaggact ataggcacct gccaccatgc
1801 ctggctaatt tttgtatttt ttttctttct ttctttcttt tctttttttt ttttttttga
1861 gacggagtct cactcttgtt gcccaggctg gacaacaatg gcgcgatctc ggctcactgc
1921 aacctccacc tcccggattc aagcgattct cctgcctcag cctcctgagt agctggaact
1981 acatgcgcgt gccaccacgc acagctaatt tttataattt tagtagagat ggggtttcac
2041 tgcgttggcc aggatgatct cgatctcttg accttgggat ccacccgcct tggcctccca
2101 aagtgctggg attacaggtg tgagccacca tgcctggccc taatttttgt gtttttatta
2161 gaaacagagt ttcaccatgt tggccaggct ggagaattgc tgtaatagtt ttccaactgg
2221 cccctgtcct tcctctctct tgctctcctc ccatctcatc tgcacctagc agccagagtg
2281 atcctgatac tctcggcctt tacttccgcc tccctcagag cagcagcctg tcaaaacacc
2341 agattacaac aaatttagtt taaaggtctc aattagcgtt attggcaatt ctagaatcag
2401 gcaacagact cattgaatca ggaacagatt cactccataa aatacagaga gtgctgcaat
2461 gagctgggta gaagaggtta gttttataga caggaagggg ctgtcaaagg cagaaagaaa
2521 tgaagaacaa aaaaaaagat tgattttttt ttttttgaga caggatctca ctctgtcatc
2581 caggctgaag tccaatccca caatcatggc tcactgcagc caccacctcc tgagctcaag
2641 tgatcctccc atctaagccc ccaagtagct aggactacag gagcacacca ccacacctgg
2701 ctaatttttg tattttttgt ggagacaggg tctcagtatg ttacccaggt tggactggaa
2761 acccttggct caagcaattt gcctgcctca gcctcccaaa gtgctgggat tacaggcgtg
2821 agccactgca cagggccaga ttcatcattt caaagttact ttctatatgc ggccggaaca
2881 gggtggttga catcagtttt cttcaggtta ctttttaata atgattaaaa cggggaactt
2941 cattatcaaa aaaaaaaaaa aaaaaa
//