LOCUS BC008751 3061 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens calpain 1, (mu/I) large subunit, mRNA (cDNA clone MGC:3082 IMAGE:3347480), complete cds. ACCESSION BC008751 VERSION BC008751.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3061) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3061) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC008751.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 5 Row: k Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 12408655. FEATURES Location/Qualifiers source 1..3061 /db_xref="H-InvDB:HIT000033946" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3082 IMAGE:3347480" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3061 /gene="CAPN1" /gene_synonym="CANP" /gene_synonym="CANPL1" /gene_synonym="muCANP" /gene_synonym="muCL" /db_xref="GeneID:823" /db_xref="HGNC:HGNC:1476" /db_xref="MIM:114220" CDS 134..2278 /gene="CAPN1" /gene_synonym="CANP" /gene_synonym="CANPL1" /gene_synonym="muCANP" /gene_synonym="muCL" /codon_start=1 /product="calpain 1, (mu/I) large subunit" /protein_id="AAH08751.1" /db_xref="GeneID:823" /db_xref="HGNC:HGNC:1476" /db_xref="MIM:114220" /translation="MSEEIITPVYCTGVSAQVQKQRARELGLGRHENAIKYLGQDYEQ LRVRCLQSGTLFRDEAFPPVPQSLGYKDLGPNSSKTYGIKWKRPTELLSNPQFIVDGA TRTDICQGALGDCWLLAAIASLTLNDTLLHRVVPHGQSFQNGYAGIFHFQLWQFGEWV DVVVDDLLPIKDGKLVFVHSAEGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFT GGVTEWYELRKAPSDLYQIILKALERGSLLGCSIDISSVLDMEAITFKKLVKGHAYSV TGAKQVNYRGQVVSLIRMRNPWGEVEWTGAWSDSSSEWNNVDPYERDQLRVKMEDGEF WMSFRDFMREFTRLEICNLTPDALKSRTIRKWNTTLYEGTWRRGSTAGGCRNYPATFW VNPQFKIRLDETDDPDDYGDRESGCSFVLALMQKHRRRERRFGRDMETIGFAVYEVPP ELVGQPAVHLKRDFFLANASRARSEQFINLREVSTRFRLPPGEYVVVPSTFEPNKEGD FVLRFFSEKSAGTVELDDQIQANLPDEQVLSEEEIDENFNALFRQLAGEDMEISVKEL RTILNRIISKHKDLRTKGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIF RKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELIITRYSEPDLAVDFDNFVCCLVRL ETMFRFFKTLDTDLDGVVTFDLFKWLQLTMFA" BASE COUNT 651 a 918 c 912 g 580 t ORIGIN 1 ggagggcgga gggcggaggg gcggcgggag gagggcgggg aggagcgctc ttcctggttg 61 ggccctgccc tgagctgcca ccgggaagcc agcctcaggg actgcagcga cccccaaaca 121 cccctccccc aggatgtcgg aggagatcat cacgccggtg tactgcactg gggtgtcagc 181 ccaagtgcag aagcagcggg ccagggagct gggcctgggc cgccatgaga atgccatcaa 241 gtacctgggc caggattatg agcagctgcg ggtgcgatgc ctgcagagtg ggaccctctt 301 ccgtgatgag gccttccccc cggtacccca gagcctgggt tacaaggacc tgggtcccaa 361 ttcctccaag acctatggca tcaagtggaa gcgtcccacg gaactgctgt caaaccccca 421 gttcattgtg gatggagcta cccgcacaga catctgccag ggagcactgg gggactgctg 481 gctcttggcg gccatcgcct ccctcactct caacgacacc ctcctgcacc gagtggttcc 541 gcacggccag agcttccaga atggctatgc cggcatcttc catttccagc tgtggcaatt 601 tggggagtgg gtggacgtgg tcgtggatga cctgctgccc atcaaggacg ggaagctagt 661 gttcgtgcac tctgccgaag gcaacgagtt ctggagcgcc ctgcttgaga aggcctatgc 721 caaggtaaat ggcagctacg aggccctgtc agggggcagc acctcagagg gctttgagga 781 cttcacaggc ggggttaccg agtggtacga gttgcgcaag gctcccagtg acctctacca 841 gatcatcctc aaggcgctgg agcggggctc cctgctgggc tgctccatag acatctccag 901 cgttctagac atggaggcca tcactttcaa gaagttggtg aagggccatg cctactctgt 961 gaccggggcc aagcaggtga actaccgagg ccaggtggtg agcctgatcc ggatgcggaa 1021 cccctggggc gaggtggagt ggacgggagc ctggagcgac agctcctcag agtggaacaa 1081 cgtggaccca tatgaacggg accagctccg ggtcaagatg gaggacgggg agttctggat 1141 gtcattccga gacttcatgc gggagttcac ccgcctggag atctgcaacc tcacacccga 1201 cgccctcaag agccggacca tccgcaaatg gaacaccaca ctctacgaag gcacctggcg 1261 gcgggggagc accgcggggg gctgccgaaa ctacccagcc accttctggg tgaaccctca 1321 gttcaagatc cggctggatg agacggatga cccggacgac tacggggacc gcgagtcagg 1381 ctgcagcttc gtgctcgccc ttatgcagaa gcaccgtcgc cgcgagcgcc gcttcggccg 1441 cgacatggag actattggct tcgcggtcta cgaggtccct ccggagctgg tgggccagcc 1501 ggccgtacac ttgaagcgtg acttcttcct ggccaatgcg tctcgggcgc gctcagagca 1561 gttcatcaac ctgcgagagg tcagcacccg cttccgcctg ccacccgggg agtatgtggt 1621 ggtgccctcc accttcgagc ccaacaagga gggcgacttc gtgctgcgct tcttctcaga 1681 gaagagtgct gggactgtgg agctggatga ccagatccag gccaatctcc ccgatgagca 1741 agtgctctca gaagaggaga ttgacgagaa cttcaatgcc ctcttcaggc agctggcagg 1801 ggaggacatg gagatcagcg tgaaggagtt gcggacaatc ctcaatagga tcatcagcaa 1861 acacaaagac ctgcggacca agggcttcag cctagagtcg tgccgcagca tggtgaacct 1921 catggatcgt gatggcaatg ggaagctggg cctggtggag ttcaacatcc tgtggaaccg 1981 catccggaat tacctgtcca tcttccggaa gtttgacctg gacaagtcgg gcagcatgag 2041 tgcctacgag atgcggatgg ccattgagtc ggcaggcttc aagctcaaca agaagctgta 2101 cgagctcatc atcacccgct actcggagcc cgacctggcg gtcgactttg acaatttcgt 2161 ttgctgcctg gtgcggctag agaccatgtt ccgatttttc aaaactctgg acacagatct 2221 ggatggagtt gtgacctttg acttgtttaa gtggttgcag ctgaccatgt ttgcatgagg 2281 cagggactcg gtcccccttg ccgtgctccc ctccctcctc gtctgccaag cctcgcctcc 2341 taccacacca caccaggcca ccccagctgc aagtgccttc cttggagcag agaggcagcc 2401 tcgtcctcct gtcccctctc ctcccagcca ccatcgttca tctgctccgg gcagaactgt 2461 gtggcccctg cctgtgccag ccatgggctc gggatggact ccctgggccc cacccattgc 2521 caagccagga aggcagcttt cgcttgttcc tgcctcggga cagccccggg tttccccagc 2581 atcctgatgt gtcccctctc cccacttcag aggccaccca ctcagcacca ccggcctggc 2641 cttgcctgca gactataaac tataaccact agctcgacac agtctgcagt ccaggcgtgt 2701 ggagccgcct cccggctcgg ggaggccccg gggctgggaa cgcctgtgcc ttcctgcgcc 2761 gaagccaacg ccccctctgt ccttccctgg ccctgctgcc gaccaggagc tgcccagcct 2821 gtgggcggtc ggccttccct ccttcgctcc ttttttatat tagtgatttt aaaggggact 2881 cttcagggac ttgtgtactg gttatggggg tgccagaggc actaggcttg gggtggggag 2941 gtcccgtgtt ccatatagag gaaccccaaa taataaaagg ccccacatct gtctgtgaaa 3001 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3061 a //