LOCUS BC008750 1626 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens necdin homolog (mouse), mRNA (cDNA clone MGC:1697
IMAGE:3347128), complete cds.
ACCESSION BC008750
VERSION BC008750.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1626)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1626)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: k Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10800414.
FEATURES Location/Qualifiers
source 1..1626
/db_xref="H-InvDB:HIT000033945"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1697 IMAGE:3347128"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1626
/gene="NDN"
/gene_synonym="HsT16328"
/db_xref="GeneID:4692"
/db_xref="HGNC:HGNC:7675"
/db_xref="MIM:602117"
CDS 64..1029
/gene="NDN"
/gene_synonym="HsT16328"
/codon_start=1
/product="necdin homolog (mouse)"
/protein_id="AAH08750.1"
/db_xref="GeneID:4692"
/db_xref="HGNC:HGNC:7675"
/db_xref="MIM:602117"
/translation="MSEQSKDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSP
PLGPTAAPQAAPPPQAPNDEGDPKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQKA
HELMWYVLVKDQKKMIIWFPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSL
HTMEFALVKALEPEELDRVALSNRMPMTGLLLMILSLIYVKGRGARESAVWNVLRILG
LRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIM
EFLARVFKKDPQAWPSRYREALEEARALREANPTAHYPRSSVSED"
BASE COUNT 389 a 440 c 459 g 338 t
ORIGIN
1 cacgagggca ggctcgaaga gctcctggac gcagaggccc tgcccttgcc agacggcgca
61 gacatgtcag aacaaagtaa ggatctgagc gaccctaact ttgcagccga ggcccccaac
121 tccgaggtgc acagcagccc tggggtttcg gagggggttc ctccgtccgc gaccctggca
181 gagccgcaga gccctcctct aggcccgacg gccgctccgc aggccgcgcc gcctccccag
241 gccccgaacg acgagggcga cccgaaggcc ctgcagcagg ctgcggagga gggccgcgcc
301 caccaggccc cgagcgcggc ccagccgggc ccggcaccgc cagccccggc gcagctggtg
361 cagaaggcgc acgagctcat gtggtacgtg ctggtcaagg accagaagaa gatgatcatc
421 tggtttccag acatggtgaa agatgtcatc ggcagctaca agaagtggtg caggagcatc
481 ctccggcgca ccagcctcat cctcgcccgg gtgttcgggc tgcacctgag gctaaccagc
541 ctgcacacca tggagtttgc gctggtcaaa gcgctggagc ccgaggagct ggacagggtg
601 gcgctgagca accgcatgcc catgacaggc ctcctgctca tgatcctgag cctcatctac
661 gtgaagggcc gcggcgccag agagagcgcc gtctggaacg tgctgcgcat cctggggctg
721 cggccctgga agaagcactc caccttcggg gacgtgcgga agctcatcac tgaggagttc
781 gtccaaatga attacctgaa gtaccagcgc gtcccatacg tggagccgcc cgaatacgag
841 ttcttttggg gctcccgggc cagccgcgaa atcaccaaga tgcaaatcat ggagttcctg
901 gccagggtct ttaagaaaga cccccaggcc tggccctccc gatacagaga agctctggag
961 gaggccagag ctctgcggga ggctaatccc actgcccact accctcgcag cagtgtctct
1021 gaggactagc aaagtctgga ggcagatgaa tggtttctga ccctcaccag ggctgtggaa
1081 gggtgggggt gggtcattat agtattcagg atttacagtg cagtattcac gtgtaacttt
1141 taagttttca gtacagtgct tttatacctt taatgcaatg ttgtattcat ttgggtacta
1201 ttgtgtagta tttaggatgt atgcatgttt gtttatatgt aagcttggtt ggtgctttcg
1261 cttttgtgct acctttcttg gatttttgta ccagagatgt gctaaactga tgaaatacat
1321 tgagaaagtt tccatcttat tcttttatat gggactgatg atgtgtgttg gggtagactg
1381 ctcctgcaga gtttggaaga agtcaccagc aaagccggcc taaccaagaa aagtcaaggc
1441 ccttcatgac cttgctgggc acagaaaaca ccctcgtgga gtacactaat ttgaactgga
1501 ctggtctcag tgtgagcact tggcacactt tactaaacac atatacaacc ccaccgtgag
1561 tcaactttaa agtaaacatt aaagattctt gtgatacaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaa
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