LOCUS       BC008732                2058 bp    mRNA    linear   HUM 17-NOV-2006
DEFINITION  Homo sapiens anterior pharynx defective 1 homolog A (C. elegans),
            mRNA (cDNA clone MGC:706 IMAGE:3162330), complete cds.
ACCESSION   BC008732
VERSION     BC008732.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2058)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2058)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAY-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 19, 2003 this sequence version replaced BC008732.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 5 Row: m Column: 3
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 7705786.
FEATURES             Location/Qualifiers
     source          1..2058
                     /db_xref="H-InvDB:HIT000033930"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:706 IMAGE:3162330"
                     /tissue_type="Brain, neuroblastoma"
                     /clone_lib="NIH_MGC_19"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..2058
                     /gene="APH1A"
                     /gene_synonym="6530402N02Rik"
                     /gene_synonym="APH-1A"
                     /gene_synonym="CGI-78"
                     /db_xref="GeneID:51107"
                     /db_xref="HGNC:HGNC:29509"
                     /db_xref="MIM:607629"
     CDS             157..900
                     /gene="APH1A"
                     /gene_synonym="6530402N02Rik"
                     /gene_synonym="APH-1A"
                     /gene_synonym="CGI-78"
                     /codon_start=1
                     /product="anterior pharynx defective 1 homolog A (C.
                     elegans)"
                     /protein_id="AAH08732.1"
                     /db_xref="GeneID:51107"
                     /db_xref="HGNC:HGNC:29509"
                     /db_xref="MIM:607629"
                     /translation="MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLV
                     SLLLASVVWFILVHVTDRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLA
                     SLSEDGRSPISIRQMAYVSGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTS
                     AFLTAAIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIY
                     AVTVSMGLWAFITAGGSLRSIQRSLLCKD"
BASE COUNT          377 a          571 c          542 g          568 t
ORIGIN      
        1 gttccccccc ttccccttcc ccggggtctg ggggtgacat tgcaccgcgc ccctcgtggg
       61 gtcgcgttgc caccccacgc ggactcccca gctggcgcgc ccctcccatt tgcctgtcct
      121 ggtcaggccc ccacccccct tcccacctga ccagccatgg gggctgcggt gtttttcggc
      181 tgcactttcg tcgcgttcgg cccggccttc gcgcttttct tgatcactgt ggctggggac
      241 ccgcttcgcg ttatcatcct ggtcgcaggg gcatttttct ggctggtctc cctgctcctg
      301 gcctctgtgg tctggttcat cttggtccat gtgaccgacc ggtcagatgc ccggctccag
      361 tacggcctcc tgatttttgg tgctgctgtc tctgtccttc tacaggaggt gttccgcttt
      421 gcctactaca agctgcttaa gaaggcagat gaggggttag catcgctgag tgaggacgga
      481 agatcaccca tctccatccg ccagatggcc tatgtttctg gtctctcctt cggtatcatc
      541 agtggtgtct tctctgttat caatattttg gctgatgcac ttgggccagg tgtggttggg
      601 atccatggag actcacccta ttacttcctg acttcagcct ttctgacagc agccattatc
      661 ctgctccata ccttttgggg agttgtgttc tttgatgcct gtgagaggag acggtactgg
      721 gctttgggcc tggtggttgg gagtcaccta ctgacatcgg gactgacatt cctgaacccc
      781 tggtatgagg ccagcctgct gcccatctat gcagtcactg tttccatggg gctctgggcc
      841 ttcatcacag ctggagggtc cctccgaagt attcagcgca gcctcttgtg taaggactga
      901 ctacctggac tgatcgcctg acagatccca cctgcctgtc cactgcccat gactgagccc
      961 agccccagcc cgggtccatt gcccacattc tctgtctcct tctcgtcggt ctaccccact
     1021 acctccaggg ttttgctttg tccttttgtg accgttagtc tctaagcttt accaggagca
     1081 gcctgggttc agccagtcag tgactggtgg gtttgaatct gcacttatcc ccaccacctg
     1141 gggaccccct tgttgtgtcc aggactcccc ctgtgtcagt gctctgctct caccctgccc
     1201 aagactcacc tcccttcccc tctgcaggcc gacggcagga ggacagtcgg gtgatggtgt
     1261 attctgccct gcgcatccca cccgaggact gagggaacct aggggggacc cctgggcctg
     1321 gggtgccctc ctgatgtcct cgccctgtat ttctccatct ccagttctgg acagtgcagg
     1381 ttgccaagaa aagggaccta gtttagccat tgccctggag atgaaattaa tggaggctca
     1441 aggatagatg agctctgagt ttctcagtac tccctcaaga ctggacatct tggtcttttt
     1501 ctcaggcctg agggggaacc atttttggtg tgataaatac cctaaactgc ctttttttct
     1561 tttttgaggt ggggggaggg aggaggtata ttggaactct tctaacctcc ttgggctata
     1621 ttttctctcc tcgagttgct cctcatggct gggctcattt cggtcccttt ctccttggtc
     1681 ccagaccttg ggggaaagga aggaagtgca tgtttgggaa ctggcattac tggaactaat
     1741 ggttttaacc tccttaacca ccagcatccc tcctctcccc aaggtgaagt ggagggtgct
     1801 gtggtgagct ggccactcca gagctgcagt gccactggag gagtcagact accatgacat
     1861 cgtagggaag gaggggagat ttttttgtag tttttaattg gggtgtggga ggggcgggga
     1921 ggttttctat aaactgtatc attttctgct gagggtggag tgtcccatcc ttttaatcaa
     1981 ggtgattgtg attttgacta ataaaaaaga atttgtaaaa aaaaaaaaaa aaaaaaaaaa
     2041 aaaaaaaaaa aaaaaaaa
//