LOCUS BC008721 1489 bp mRNA linear HUM 18-JAN-2007
DEFINITION Homo sapiens RAB7A, member RAS oncogene family, mRNA (cDNA clone
MGC:8453 IMAGE:2821435), complete cds.
ACCESSION BC008721
VERSION BC008721.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1489)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1489)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008721.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: f Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40807361.
FEATURES Location/Qualifiers
source 1..1489
/db_xref="H-InvDB:HIT000033922"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8453 IMAGE:2821435"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1489
/gene="RAB7A"
/gene_synonym="PRO2706"
/db_xref="GeneID:7879"
/db_xref="HGNC:HGNC:9788"
/db_xref="MIM:602298"
CDS 176..799
/gene="RAB7A"
/gene_synonym="PRO2706"
/codon_start=1
/product="RAB7A, member RAS oncogene family"
/protein_id="AAH08721.2"
/db_xref="GeneID:7879"
/db_xref="HGNC:HGNC:9788"
/db_xref="MIM:602298"
/translation="MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGAD
FLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSW
RDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAI
NVEQAFQTIARNALKQETEVELYNEFPEPIKLDKNDRAKASAESCSC"
BASE COUNT 414 a 378 c 348 g 349 t
ORIGIN
1 ataaagcctg aggcggcggc agcggcggag ttggcggctt ggagagctcg ggagagttcc
61 ctggaaccag aacttggacc ttctcgcttc tgtcctccgt ttagtctcct cctcggcggg
121 agccctcgcg acgcgcccgg cccggagccc ccagcgcagc ggccgcgttt gaaggatgac
181 ctctaggaag aaagtgttgc tgaaggttat catcctggga gattctggag tcgggaagac
241 atcactcatg aaccagtatg tgaataagaa attcagcaat cagtacaaag ccacaatagg
301 agctgacttt ctgaccaagg aggtgatggt ggatgacagg ctagtcacaa tgcagatatg
361 ggacacagca ggacaggaac ggttccagtc tctcggtgtg gccttctaca gaggtgcaga
421 ctgctgcgtt ctggtatttg atgtgactgc ccccaacaca ttcaaaaccc tagatagctg
481 gagagatgag tttctcatcc aggccagtcc ccgagatcct gaaaacttcc catttgttgt
541 gttgggaaac aagattgacc tcgaaaacag acaagtggcc acaaagcggg cacaggcctg
601 gtgctacagc aaaaacaaca ttccctactt tgagaccagt gccaaggagg ccatcaacgt
661 ggagcaggcg ttccagacga ttgcacggaa tgcacttaag caggaaacgg aggtggagct
721 gtacaacgaa tttcctgaac ctatcaaact ggacaagaat gaccgggcca aggcctcggc
781 agaaagctgc agttgctgag ggggcagtga gagttgagca cagagtcctt cacaaaccaa
841 gaacacacgt aggccttcaa cacaattccc ctctcctctt ccaaacaaaa catacattga
901 tctctcacat ccagctgcca aaagaaaacc ccatcaaaca cagttacacc ccacatatct
961 cgcacacaca cacacacacg cacacacaca cacacagatc tgacgtaatc aaactccagc
1021 ccttgcccgt gatggctcct tggggtctgc ctgcccaccc acatgagccc gcgagtatgg
1081 cagcaggaca agccagcggt ggaagtcatt ctgatatgga gttggcattg gaagcttatt
1141 ctttttgttc actggagaga gagagaactg tttacagtta atctgtgtct aattatctga
1201 ttttttttat tggtcttgtg gtctttttac cccccctttc ccctccctcc ttgaaggcta
1261 ccccttggga aggctggtgc cccatgcccc attacaggct cacacccagt ctgatcaggc
1321 tgagttttgt atgtatctat ctgttaatgc ttgttacttt taactaatca gatcttttta
1381 cagtatccat ttattatgta atgcttctta gaaaagaatc ttatagtaca tgttaatata
1441 tgcaaccaat taaaatgtat aaattagtgt aaaaaaaaaa aaaaaaaaa
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