LOCUS BC008700 1723 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens nucleoporin 160kDa, mRNA (cDNA clone IMAGE:2960535),
partial cds.
ACCESSION BC008700
VERSION BC008700.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1723)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1723)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: b Column: 4.
FEATURES Location/Qualifiers
source 1..1723
/db_xref="H-InvDB:HIT000087139"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2960535"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1723
/gene="NUP160"
/gene_synonym="FLJ22583"
/gene_synonym="KIAA0197"
/db_xref="GeneID:23279"
/db_xref="MIM:607614"
CDS <1..718
/gene="NUP160"
/gene_synonym="FLJ22583"
/gene_synonym="KIAA0197"
/codon_start=2
/product="NUP160 protein"
/protein_id="AAH08700.1"
/db_xref="GeneID:23279"
/db_xref="MIM:607614"
/translation="HDPSAVAVAGSSSAEEMVTLLVQAGLFDTAISLCQTFKLPLTPV
FEGLAFKCIKLQFGGEAAQAEAWAWLAANQLSSVITTKESSATDEAWRLLSTYLERYK
VQNNLYHHCVINKLLSHGVPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVDLVSEYV
DAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALGENSANSHNIALSQKILDKL
EDYQQKVDKATRDLLYRRTL"
BASE COUNT 515 a 328 c 324 g 556 t
ORIGIN
1 gcatgatcca tcagcggttg cagttgctgg aagttcatca gcagaggaaa tggtcactct
61 cttggttcag gcgggcctct ttgacactgc catatcactc tgtcagactt ttaagcttcc
121 cttaacgcca gtctttgaag ggcttgcctt caaatgcatc aaattgcaat ttggaggaga
181 ggcagcacaa gcagaagcct gggcctggct agcagccaat cagctctcat ctgtcatcac
241 tactaaggag tctagtgcta cagatgaagc atggcgacta ttatccactt acctggagag
301 gtacaaagtc cagaataact tgtatcacca ctgtgtaatc aacaagctct tgtctcatgg
361 agtgcctctg cctaattggc ttataaacag ttacaagaag gttgatgctg ctgaattgct
421 tcgtttatac ttaaactatg accttttaga agaagctgtg gatttggtgt cagaatatgt
481 ggatgctgta ttgggaaaag gacatcaata cttcggaatt gagtttccac tgtccgcaac
541 agccccaatg gtgtggcttc catactcctc tattgatcag cttctccaag ctctgggaga
601 gaacagtgcc aacagtcaca acatcgcact gtcccagaaa atacttgaca aattggagga
661 ctaccagcaa aaagttgata aggcaacacg ggatttatta tatcgtcgga ccttgtgatt
721 tggattgtca cctagccttt gtaaccgctt ggtgcctctt aggacttaag actaccctac
781 aggaaccctg tactcaaggc cgatttttgt aactgtaaat gatgtgtaca acattcaagt
841 ctgcattctg cacaagatag gagggcggaa gagtcagagg accctgtgct tgctggtggt
901 gctaacacaa tttctggtgt tcaaccttgg tctcaaatag ctgcttttgt atatgattca
961 cgagcttttt tagagtttat atttttttaa actaccgaag acattcatta tctgcaaatt
1021 aagactcacc ttcactttcc aaaatagctg agggttgttg gcttgttgta gctgaccacc
1081 aaaagcagtc actgcaaatc ttttaattct tccctatcac cttttgtatt ttaatgcaat
1141 tattttggtc cagaactgac ctgtattttc tgtattgtac acaaaagcta ataattttgt
1201 gtacttttta tttattttgg aggttttata tgatcttcaa ttgagtatta aataatttgc
1261 ctagattaag cctaaaatga tgaccagcta attaaagaag atattttgaa tctggttctg
1321 agctaaagtt gagtaaattc ttagctaaga aaaaattgga aatccatcat ctatattagc
1381 aacagattct cagagtaaat tgttaacttc tatgatttat gataatcaag ctggacttga
1441 tcatacaagt tagtctcata atgtattgga ccaaaatgta aacttcattg gtcagattta
1501 gaagcattca tgctcacaag ttttgggaaa gtgaaaaata ataaaatcat cttggatttt
1561 attctgtata ttaaaattta tcttttaagg aaacaatctg tatactactt gcttgtatag
1621 ccttttgacc cttcttgagt ttttcagaag cctttaattt ttatactttc aataccatat
1681 ttacattata tactttaatt aacaaaaaaa aaaaaaaaaa aaa
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