LOCUS BC008687 1675 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens neurogenin 1, mRNA (cDNA clone MGC:9390 IMAGE:3872172), complete cds. ACCESSION BC008687 VERSION BC008687.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1675) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1675) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: l Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38455395. FEATURES Location/Qualifiers source 1..1675 /db_xref="H-InvDB:HIT000033900" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9390 IMAGE:3872172" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1675 /gene="NEUROG1" /gene_synonym="AKA" /gene_synonym="Math4C" /gene_synonym="ngn1" /db_xref="GeneID:4762" /db_xref="HGNC:HGNC:7764" /db_xref="MIM:601726" CDS 260..973 /gene="NEUROG1" /gene_synonym="AKA" /gene_synonym="Math4C" /gene_synonym="ngn1" /codon_start=1 /product="neurogenin 1" /protein_id="AAH08687.1" /db_xref="GeneID:4762" /db_xref="HGNC:HGNC:7764" /db_xref="MIM:601726" /translation="MPARLETCISDLDCASSSGSDLSGFLTDEEDCARLQQAASASGP PAPARRGAPNISRASEVPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRER NRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLADQGLPGGGA RERLLPPQCVPCLPGPPSPASDAESWGSGAAAASPLSDPSSPAASEDFTYRPGDPVFS FPSLPKDLLHTTPCFIPYH" BASE COUNT 354 a 561 c 443 g 317 t ORIGIN 1 cacacgagct gatctgatcg ccggcgacat cactcaggag accggccggg cgcgtggccc 61 ctgcaggcga ggcgaggagg ccaggccaag ttctccgtgc gcccctgcac ccttccaggc 121 tctcgcaccc gcaactggca cagagtaaca accccaggct gttgggaacg taagtgcgcc 181 ctggcggctc tgccctcagt ccgggctgca gcgctctgag cgcctttcta tctgtccgtc 241 ggtcctgcac agcgcaacga tgccagcccg ccttgagacc tgcatctccg acctcgactg 301 cgccagcagc agcggcagtg acctatccgg cttcctcacc gacgaggaag actgtgccag 361 actccaacag gcagcctccg cttcggggcc gcccgcgccg gcccgcaggg gcgcgcccaa 421 tatctcccgg gcgtctgagg ttccaggggc acaggacgac gagcaggaga ggcggcggcg 481 ccgcggccgg acgcgggtcc gctccgaggc gctgctgcac tcgctgcgca ggagccggcg 541 cgtcaaggcc aacgatcgcg agcgcaaccg catgcacaac ttgaacgcgg ccctggacgc 601 actgcgcagc gtgctgccct cgttccccga cgacaccaag ctcaccaaaa tcgagacgct 661 gcgcttcgcc tacaactaca tctgggctct ggccgagaca ctgcgcctgg cggatcaagg 721 gctgcccgga ggcggtgccc gggagcgcct cctgccgccg cagtgcgtcc cctgcctgcc 781 cggtccccca agccccgcca gcgacgcgga gtcctggggc tcaggtgccg ccgccgcctc 841 cccgctctct gaccccagta gcccagccgc ctccgaagac ttcacctacc gccccggcga 901 ccctgttttc tccttcccaa gcctgcccaa agacttgctc cacacaacgc cctgtttcat 961 tccttaccac taggcccttt gtagacactg ttactttccc cctcccctag tcagcaggca 1021 atagatgggg ccccagctgc cgcctcggga ccccctctcc aggcggaggg aggaagcggg 1081 agctttaaag cagtcgggga tacctgagcc gcttgttagg tcgccgcacc ctcgcggcgg 1141 atgtctcttg gtctgtttct ccggccctca gcccagcgcc cctcctgccc gcccctagac 1201 ggcctttcct tttgcacttt ctgaactcca caaaacctcc tttgtgactg gctcagaact 1261 gaccccagcc accacttcag tgtgatttag aaaagggaca gatcagcccc tgaagacgag 1321 gtgaaaagtc aattttacaa tttgtagaac tctaatgaag aaaaacgagc atgaaaattc 1381 ggtttgagcc ggctgacaat acaatgaaaa ggcttaaaaa gcagagacaa ggagtgggct 1441 tcatgcatta tggatcccga cccccaccac tgcagactcg ctctaggaag aactggagac 1501 tcttgcttag ctattcaggc acagggctgg agagtacttt aatttattca agatgcttca 1561 ttcatatgaa aatgtatttt tgtacataaa gagtttattc tattatgagc tatcaaagtt 1621 tacatttttg tactgcagac gcttcatgta aataaaaact aaaaaaaaaa aaaaa //