LOCUS BC008654 1870 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens tubulin folding cofactor E, mRNA (cDNA clone MGC:8912
IMAGE:3872809), complete cds.
ACCESSION BC008654
VERSION BC008654.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1870)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1870)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: m Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6006029.
FEATURES Location/Qualifiers
source 1..1870
/db_xref="H-InvDB:HIT000033878"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8912 IMAGE:3872809"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1870
/gene="TBCE"
/gene_synonym="HRD"
/gene_synonym="KCS"
/gene_synonym="KCS1"
/gene_synonym="pac2"
/db_xref="GeneID:6905"
/db_xref="HGNC:HGNC:11582"
/db_xref="MIM:604934"
CDS 69..1652
/gene="TBCE"
/gene_synonym="HRD"
/gene_synonym="KCS"
/gene_synonym="KCS1"
/gene_synonym="pac2"
/codon_start=1
/product="tubulin folding cofactor E"
/protein_id="AAH08654.1"
/db_xref="GeneID:6905"
/db_xref="HGNC:HGNC:11582"
/db_xref="MIM:604934"
/translation="MSDTLTADVIGRRVEVNGEHATVRFAGVVPPVAGPWLGVEWDNP
ERGKHDGSHEGTVYFKCRHPTGGSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRKEQ
IVTIGNKPVETIGFDSIMKQQSQLSKLQEVSLRNCAVSCAGEKGGVAEACPNIRKVDL
SKNLLSSWDEVIHIADQLRHLEVLNVSENKLKFPSGSVLTGTLSVLKVLVLNQTGITW
AEVLRCVAGCPGLEELYLESNNIFISERPTDVLQTVKLLDLSSNQLIDENQLYLIAHL
PRLEQLILSDTGISSLHFPDAGIGCKTSMFPSLKYLVVNDNQISQWSFFNELEKLPSL
RALSCLRNPLTKEDKEAETARLLIIASIGQLKTLNKCEILPEERRRAELDYRKAFGNE
WKQAGGHKDPEKNRLSEEFLTAHPRYQFLCLKYGAPEDWELKTQQPLMLKNQLLTLKI
KYPHQLDQKVLEKQLPGSMTIQKVKGLLSRLLKVPVSDLLLSYESPKKPGREIELEND
LKSLQFYSVENGDCLLVRW"
BASE COUNT 588 a 374 c 435 g 473 t
ORIGIN
1 ggctgctgct gggaacacct ggagtctccg cgggcagatc tcatattttg gattctggat
61 atattataat gagtgacact ttgacagcgg atgtcattgg tcgaagagtt gaagttaatg
121 gagaacatgc aacagtacgt tttgctggtg ttgtccctcc cgtggcagga ccctggttag
181 gagtagaatg ggacaatccc gagagaggaa agcatgatgg gagccacgaa gggactgtgt
241 attttaaatg caggcacccg acaggaggat cctttattcg tccgaacaag gtaaattttg
301 gaacagactt tcttactgca attaagaacc gctatgtgtt agaagatgga ccagaggaag
361 atagaaaaga gcaaattgtt acaattggaa ataaacctgt ggagactatc ggttttgact
421 ctattatgaa acagcaaagt cagctgagca agttgcaaga agtttctctg aggaactgtg
481 cagtaagttg tgctggtgaa aaaggaggag ttgctgaagc atgtcctaat atcagaaagg
541 tagatttgtc aaaaaacctg ttgtcatcat gggatgaagt gatacacatt gctgatcagc
601 tcagacacct ggaagtcctt aatgtcagtg aaaataaact aaaatttccc tccggttcag
661 tattaactgg aacgctttct gtactgaagg ttttagtcct caatcaaaca ggaataacgt
721 gggctgaggt gctgcggtgt gtcgcggggt gcccaggcct ggaggaactc taccttgagt
781 ctaacaacat tttcatttcc gaaaggccaa cagatgttct ccagacagtc aagttattag
841 atctttcctc taatcaatta attgatgaaa atcagctgta tctgatagcc cacctgccca
901 ggttagaaca attaatcctc tctgacactg gaatttcttc tctacatttt ccggatgctg
961 gaattgggtg caaaacgtcc atgttcccat ccttgaagta cctggtagta aacgacaatc
1021 agatatcaca atggtcgttt ttcaatgagc tagagaagtt accaagtcta cgggctttgt
1081 cctgcctaag aaaccccctg accaaagagg acaaagaagc agagacggcg cgactactca
1141 ttatcgccag cattggccag ctgaagacgc tgaacaaatg tgagattctc cccgaggaga
1201 ggcggagagc tgagcttgac taccgaaaag cttttggaaa tgagtggaaa caggctggtg
1261 gacataagga tccggaaaaa aacagactca gcgaagaatt cctcacagcc catcccagat
1321 accagttcct ctgcctgaaa tatggtgcac ctgaagattg ggaactcaaa acacagcaac
1381 cacttatgct gaaaaaccag ctactaacac tgaagataaa ataccctcat caacttgatc
1441 agaaagtcct ggagaaacaa ctgccgggct ccatgacaat tcaaaaggtg aagggattgc
1501 tgtcacgtct tctcaaagtt cctgtgtcag accttctgtt gtcctatgaa agtcccaaaa
1561 agccgggcag agaaatcgag ctggaaaatg acctaaagtc attacagttt tattctgtgg
1621 aaaatggaga ttgtctatta gtgcgatggt gacaaccaac taataaaatt taaagaccac
1681 actgcttatc gtgtctgggg ttcaccggaa ataaatgatt cactggaaca attttactgt
1741 caaaacaaag ggggtttaca acttgtccta agtataacaa gggatgtatt ttttgttggg
1801 aagtgaccat ttctaggctt atacataata gcaataataa aggctttgaa cctacaaaaa
1861 aaaaaaaaaa
//