LOCUS BC008636 1410 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens keratin 18, mRNA (cDNA clone MGC:9348 IMAGE:3463780),
complete cds.
ACCESSION BC008636
VERSION BC008636.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1410)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1410)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: b Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40354193.
FEATURES Location/Qualifiers
source 1..1410
/db_xref="H-InvDB:HIT000033871"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9348 IMAGE:3463780"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1410
/gene="KRT18"
/gene_synonym="CYK18"
/gene_synonym="K18"
/db_xref="GeneID:3875"
/db_xref="HGNC:HGNC:6430"
/db_xref="MIM:148070"
CDS 40..1332
/gene="KRT18"
/gene_synonym="CYK18"
/gene_synonym="K18"
/codon_start=1
/product="keratin 18"
/protein_id="AAH08636.1"
/db_xref="GeneID:3875"
/db_xref="HGNC:HGNC:6430"
/db_xref="MIM:148070"
/translation="MSFTTRSTFSTNYRSLGSVQAPSYGARPVSSAASVYAGAGGSGS
RISVSRSTSFRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDRLASYLDRVRSLE
TENRRLESKIREHLEKKGPQVRDWSHYFKIIEDLRAQIFANTVDNARIVLQIDNARLA
ADDFRVKYETELAMRQSVENDIHGLRKVIDDTNITRLQLETEIEALKEELLFMKKNHE
EEVKGLQAQIASSGLTVEVDAPKSQDLAKIMADIRAQYDELARKNREELDKYWSQQIE
ESTTVVTTQSAEVGAAETTLTELRRTVQSLEIDLDSMRNLKASLENSLREVEARYALQ
MEQLNGILLHLESELAQTRAEGQRQAQEYEALLNIKVKLEAEIATYRRLLEDGEDFNL
GDALDSSNSMQTIQKTTTRRIVDGKVVSETNDTKVLRH"
BASE COUNT 368 a 387 c 420 g 235 t
ORIGIN
1 caaagcctga gtcctgtcct ttctctctcc ccggacagca tgagcttcac cactcgctcc
61 accttctcca ccaactaccg gtccctgggc tctgtccagg cgcccagcta cggcgcccgg
121 ccggtcagca gcgcggccag cgtctatgca ggcgctgggg gctctggttc ccggatctcc
181 gtgtcccgct ccaccagctt caggggcggc atggggtccg ggggcctggc caccgggata
241 gccgggggtc tggcaggaat gggaggcatc cagaacgaga aggagaccat gcaaagcctg
301 aacgaccgcc tggcctctta cctggacaga gtgaggagcc tggagaccga gaaccggagg
361 ctggagagca aaatccggga gcacttggag aagaagggac cccaggtcag agactggagc
421 cattacttca agatcatcga ggacctgagg gctcagatct tcgcaaatac tgtggacaat
481 gcccgcatcg ttctgcagat tgacaatgcc cgtcttgctg ctgatgactt tagagtcaag
541 tatgagacag agctggccat gcgccagtct gtggagaacg acatccatgg gctccgcaag
601 gtcattgatg acaccaatat cacacgactg cagctggaga cagagatcga ggctctcaag
661 gaggagctgc tcttcatgaa gaagaaccac gaagaggaag taaaaggcct acaagcccag
721 attgccagct ctgggttgac cgtggaggta gatgccccca aatctcagga cctcgccaag
781 atcatggcag acatccgggc ccaatatgac gagctggctc ggaagaaccg agaggagcta
841 gacaagtact ggtctcagca gattgaggag agcaccacag tggtcaccac acagtctgct
901 gaggttggag ctgctgagac gacgctcaca gagctgagac gtacagtcca gtccttggag
961 atcgacctgg actccatgag aaatctgaag gccagcttgg agaacagcct gagggaggtg
1021 gaggcccgct acgccctaca gatggagcag ctcaacggga tcctgctgca ccttgagtca
1081 gagctggcac agacccgggc agagggacag cgccaggccc aggagtatga ggccctgctg
1141 aacatcaagg tcaagctgga ggctgagatc gccacctacc gccgcctgct ggaagatggc
1201 gaggacttta atcttggtga tgccttggac agcagcaact ccatgcaaac catccaaaag
1261 accaccaccc gccggatagt ggatggcaaa gtggtgtctg agaccaatga caccaaagtt
1321 ctgaggcatt aagccagcag aagcagggta ccctttgggg agcaggaggc caataaaaag
1381 ttcagagttc aaaaaaaaaa aaaaaaaaaa
//