LOCUS BC008627 816 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ring finger protein 7, mRNA (cDNA clone MGC:17274 IMAGE:4177613), complete cds. ACCESSION BC008627 VERSION BC008627.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 816) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 816) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: h Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34304332. FEATURES Location/Qualifiers source 1..816 /db_xref="H-InvDB:HIT000033866" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17274 IMAGE:4177613" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..816 /gene="RNF7" /gene_synonym="CKBBP1" /gene_synonym="ROC2" /gene_synonym="SAG" /db_xref="GeneID:9616" /db_xref="HGNC:HGNC:10070" /db_xref="MIM:603863" CDS 37..378 /gene="RNF7" /gene_synonym="CKBBP1" /gene_synonym="ROC2" /gene_synonym="SAG" /codon_start=1 /product="ring finger protein 7" /protein_id="AAH08627.1" /db_xref="GeneID:9616" /db_xref="HGNC:HGNC:10070" /db_xref="MIM:603863" /translation="MADVEDGEETCALASHSGSSGSKSGGDKMFSLKKWNAVAMWSWD VECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLC QQDWVVQRIGK" BASE COUNT 226 a 178 c 213 g 199 t ORIGIN 1 agccaacgtc tccgccgtcg gctccgcggc gccgccatgg ccgacgtgga agacggagag 61 gaaacctgcg ccctggcctc tcactccggg agctcaggct ccaagtcggg aggcgacaag 121 atgttctccc tcaagaagtg gaacgcggtg gccatgtgga gctgggacgt ggagtgcgat 181 acgtgcgcca tctgcagggt ccaggtgatg gatgcctgtc ttagatgtca agctgaaaac 241 aaacaagagg actgtgttgt ggtctgggga gaatgtaatc attccttcca caactgctgc 301 atgtccctgt gggtgaaaca gaacaatcgc tgccctctct gccagcagga ctgggtggtc 361 caaagaatcg gcaaatgaga gtggttagaa ggcttcttag cgcagttgtt cagagccctg 421 gtggatcttg taatccagtg ccctacaaag gctagaacac tacaggggat gaattcttca 481 aataggagcc gatggatctg tggtcctttg ggactcatca aagccttggt ttagcatttt 541 gtcagtttta tcttcagaaa ttctctgcga ttaagaagat aatttattaa aggtggtcct 601 tcctacctct gtggtgtgtg tcgcgcacac agcttagaag tgctataaaa aaggaaagag 661 ctccaaattg aatcaccttt ataatttacc catttctata caacaggcag tggaagcagt 721 ttcagagaac tttttgcatg cttatggttg atcagttaaa aaagaatgtt acagtaacaa 781 ataaagtgca gtttaaaacc caaaaaaaaa aaaaaa //