LOCUS BC008586 2846 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens leucine rich repeat containing 40, mRNA (cDNA clone MGC:16864 IMAGE:2900193), complete cds. ACCESSION BC008586 VERSION BC008586.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2846) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2846) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 19 Row: a Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361632. FEATURES Location/Qualifiers source 1..2846 /db_xref="H-InvDB:HIT000033848" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:16864 IMAGE:2900193" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2846 /gene="LRRC40" /gene_synonym="dJ677H15.1" /gene_synonym="FLJ20331" /gene_synonym="RP4-677H15.1" /db_xref="GeneID:55631" /db_xref="HGNC:HGNC:26004" CDS 37..1845 /gene="LRRC40" /gene_synonym="dJ677H15.1" /gene_synonym="FLJ20331" /gene_synonym="RP4-677H15.1" /codon_start=1 /product="leucine rich repeat containing 40" /protein_id="AAH08586.1" /db_xref="GeneID:55631" /db_xref="HGNC:HGNC:26004" /translation="MSRLKRIAGQDLRAGFKAGGRDCGTSVPQGLLKAARKSGQLNLS GRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDDLR LLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQH NELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEINR MKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQ IEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNL HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESR VNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVELKEM VSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFK MLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIPT" BASE COUNT 944 a 471 c 512 g 919 t ORIGIN 1 ggtggggctg cagcttctgg acctaggact ttgaacatgt cgcgcctgaa gcggatagcg 61 gggcaggatc tccgcgctgg tttcaaagca ggtggaagag actgcggtac ctcggtaccc 121 caagggctgt tgaaggcagc gaggaagagc ggccagttaa acctgtcggg tagaaacctc 181 agtgaagtgc cgcagtgtgt ctggagaata aatgtggata tccctgagga agctaatcag 241 aatctttcgt ttggtgctac tgaaagatgg tgggagcaga cagatttgac caaactaata 301 atatcaaaca ataaacttca gtcacttaca gatgacctgc gactcttgcc tgcactgact 361 gttcttgata tacatgataa tcagttgaca tcccttcctt ctgctataag agagctagaa 421 aatcttcaga aacttaatgt cagccataat aaactgaaaa tactccctga agaaattaca 481 aacctaagaa acctgaagtg cctgtatctc cagcataatg aattaacctg catatcagag 541 ggatttgaac aactttccaa tttagaagat ttagatcttt caaacaatca tcttacaact 601 gttcctgcta gtttttcttc tctgtccagt ctggtgcgac tcaatctttc tagtaatgaa 661 ctgaagagtt tgccagcaga aataaataga atgaaaaggt tgaagcattt ggattgtaat 721 tcaaatctct tggaaactat acctcctgaa ttggctggca tggaatcact agaattgctt 781 tatttgcgga ggaataaatt acgttttcta ccagaatttc cttcttgtag tctattgaag 841 gaattgcacg taggtgaaaa ccagattgaa atgttagagg cagaacatct taaacatctg 901 aattcaattc ttgtgctaga cctgagggat aacaagttaa aatctgttcc agatgaaatt 961 atactactac ggtccttgga aaggcttgac ctaagcaaca atgatattag tagtcttccc 1021 tattcattgg ggaaccttca tttgaaattt ttggcattag aaggaaatcc tttgagaaca 1081 attcgaagag aaattataag taaaggaaca caagaagtcc taaaatatct acgaagcaag 1141 atcaaagatg atggacctag ccaaagtgag tctgctactg agactgccat gacactacca 1201 agtgaatcca gagtcaatat acatgccatc attacattaa aaatattaga ctatagtgat 1261 aaacaagcaa ctttgattcc tgatgaggtg tttgatgcag taaaaagcaa catcgtcact 1321 tctattaact tcagtaagaa tcaactatgt gaaattccaa aaaggatggt agaactgaag 1381 gaaatggttt ctgatgtcga tctcagtttt aataaacttt cctttatatc cttggagtta 1441 tgtgtgcttc agaaattgac ttttttagat ctcaggaaca attttttaaa ttctttgcca 1501 gaagaaatgg aatcactggt aagactgcaa acgatcaatc tttcctttaa taggtttaaa 1561 atgctacctg aagttctata tcgtatcttc acacttgaaa caattctgat tagtaataat 1621 caggttggat ctgtggaccc tcagaaaatg aagatgatgg aaaatctgac cacgttggac 1681 cttcaaaata atgacctctt acaaattcca ccagagctcg gtaattgtgt aaacttaaga 1741 acattactac tggatggaaa tccattccga gttcctcgag cagccatatt aatgaaagga 1801 acagctgcta tacttgaata tttgagagac cgaattccta cttaacatgg agttgcttta 1861 taacccttgt catgtattat taaccctggt taattctaag gaggatgtaa catttgtttt 1921 agtatcatct taaaaggtga ttattgtaat tgatcttgta gtttcccagt atcacctacc 1981 tgttggtata attagcctgg gccatattca ctgccagtaa atatttttac atttttattt 2041 aagatttttg taaggtgttg tatacatttg taatggtgat aaccacaatg tgttcataca 2101 tttgttctaa atgttttgct tatgatttat cctgctaact ttcattttct tatagcaagc 2161 agttttttca aaaatgaatt tttatttaat gtggttcagt attataataa caaagcattt 2221 ttgtagaact ggtttttttt ctcatttatt tttgtattcc atacaatgtg accaattgac 2281 ttgaatatga ctagccagtt tctatgtttt tgttagatat aaaattaaat cgaattttgt 2341 tgaatactgt tctttggcat ttaaaaaata agaccttctt atcttgggcc acatgtcaaa 2401 agaaaaagga aacaaaaata tattaaaaat aagacttttc attacccatg ataggacttt 2461 tgtgatatgg ctaatctcag tacacatttc aacttaaaac ctttttattt acagcaccat 2521 aattttaaaa tttacttgca atcttggtaa gactaaactt gcagtgtttt tctaaaaggg 2581 aatttgatag gtaaacttga tttaataaaa attaaatatc atttttgttt acaccaaaat 2641 tatcagaagt aggttgatta gtcattataa cacttaccat atgattctat taagaagtca 2701 attcagtagc atgtatatca atttatatag ataggtagat agcttttgga tgattgaggc 2761 atgcttatat tatgaaaaaa attgctaata aagataaata ctacatgttc agaataaaag 2821 ttacattttt caaaaaaaaa aaaaaa //