LOCUS BC008572 579 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens hemoglobin, alpha 1, mRNA (cDNA clone MGC:17020 IMAGE:4177243), complete cds. ACCESSION BC008572 VERSION BC008572.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 579) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 579) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: g Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14043068. FEATURES Location/Qualifiers source 1..579 /db_xref="H-InvDB:HIT000033843" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17020 IMAGE:4177243" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..579 /gene="HBA1" /gene_synonym="CD31" /db_xref="GeneID:3039" /db_xref="HGNC:HGNC:4823" /db_xref="MIM:141800" CDS 24..452 /gene="HBA1" /gene_synonym="CD31" /codon_start=1 /product="hemoglobin, alpha 1" /protein_id="AAH08572.1" /db_xref="GeneID:3039" /db_xref="HGNC:HGNC:4823" /db_xref="MIM:141800" /translation="MVLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYF PHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLL SHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR" BASE COUNT 115 a 208 c 156 g 100 t ORIGIN 1 cacagactca gagagaaccc accatggtgc tgtctcctgc cgacaagacc aacgtcaagg 61 ccgcctgggg taaggtcggc gcgcacgctg gcgagtatgg tgcggaggcc ctggagagga 121 tgttcctgtc cttccccacc accaagacct acttcccgca cttcgacctg agccacggct 181 ctgcccaggt taagggccac ggcaagaagg tggccgacgc gctgaccaac gccgtggcgc 241 acgtggacga catgcccaac gcgctgtccg ccctgagcga cctgcacgcg cacaagcttc 301 gggtggaccc ggtcaacttc aagctcctaa gccactgcct gctggtgacc ctggccgccc 361 acctccccgc cgagttcacc cctgcggtgc acgcctccct ggacaagttc ctggcttctg 421 tgagcaccgt gctgacctcc aaataccgtt aagctggagc ctcggtagcc gttcctcctg 481 cccgctgggc ctcccaacgg gccctcctcc cctccttgca ccggcccttc ctggtctttg 541 aataaagtct gagtgggcgg caaaaaaaaa aaaaaaaaa //