LOCUS BC008500 1730 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens mitochondrial carrier triple repeat 1, mRNA (cDNA
clone MGC:14836 IMAGE:4286914), complete cds.
ACCESSION BC008500
VERSION BC008500.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1730)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1730)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: d Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15529971
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..1730
/db_xref="H-InvDB:HIT000033834"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14836 IMAGE:4286914"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1730
/gene="MCART1"
/gene_synonym="CG7943"
/db_xref="GeneID:92014"
/db_xref="HGNC:HGNC:23323"
CDS 212..1105
/gene="MCART1"
/gene_synonym="CG7943"
/codon_start=1
/product="MCART1 protein"
/protein_id="AAH08500.1"
/db_xref="GeneID:92014"
/db_xref="HGNC:HGNC:23323"
/translation="MMDSEAHEKRPPILTSSKQDISPHITNVGEMKHYLCGCCAAFNN
VAITFPIQKVLFRQQLYGIKTRDAILQLRRDGFRNLYRGILPPLMQKTTTLALMFGLY
EDLSCLLHKHVSAPEFATSGVAAVLAGTTEAIFTPLERVQTLLQDHKHHDKFTNTYQA
FKALKCHGIGEYYRGLVPILFRNGLSNVLFFGLRGPIKEHLPTATTHSAHLVNDFICG
GLLGAMLGFLFFPINVVKTRIQSQIGGEFQSFPKVFQKIWLERDRKLINLFRGAHLNY
HRSLISWGIINATYEFLLKVI"
BASE COUNT 504 a 372 c 373 g 481 t
ORIGIN
1 gcgggccccg gctcgctagc cgtcctgcgg gacgccggcg ctgatgggaa atccagttat
61 caaaattgac tcaagaagag agaacctaac agaacaataa caatggaaga aattgggaac
121 attatcacaa agctatcatc ctgccaaact ccaggctcag atgtcacagg ttaaaaaaag
181 tccttcatga aaaagaaaga tcttaagcag catgatggat tcagaagctc atgaaaagag
241 gccaccaata ctaacatctt caaaacaaga tatatcacct catattacaa atgttggtga
301 gatgaagcat tacttgtgtg gctgctgtgc agccttcaac aatgtcgcaa tcacatttcc
361 cattcagaag gtcctctttc gacaacagct gtatggcatc aaaacccggg atgcaatact
421 tcagttgaga agggatggat ttcgaaattt gtatcgtgga atccttcccc cattgatgca
481 gaagacaact acgcttgcac ttatgtttgg tctgtatgag gatttatcct gccttctcca
541 caagcatgtc agtgctccag agtttgcaac cagtggcgtg gcggcagtgc ttgcagggac
601 aacagaagca attttcactc cactggaaag agttcagaca ttgcttcaag accacaagca
661 tcatgacaaa tttaccaaca cttaccaggc tttcaaggca ctgaaatgtc atggaattgg
721 agagtattat cgaggcttgg tgcccattct tttccggaat ggactcagca atgtcttgtt
781 tttcggcctt cgaggtccca ttaaggagca tctgcctacc gcaacgactc acagtgctca
841 tctggtcaat gattttatct gtggaggtct attgggtgcc atgttgggat tcttgttttt
901 tccaattaat gttgtaaaaa ctcgcataca gtctcagatt ggtggggaat ttcagtcttt
961 ccccaaggtt ttccaaaaaa tctggctgga acgggacaga aaactgataa atcttttcag
1021 aggtgcccat ctgaattacc atcggtccct catctcttgg ggcataatca atgcaactta
1081 tgagttcttg ttaaaggtta tatgaaaaaa ccatcagtta agtgccattt atcaactgaa
1141 tagaccttct aagaagaatg cagtttggcc tctttttttt ttttttttaa aggaaatccc
1201 aatcttatta tggaaagcca tcaactgggt gtggggagta ggtcagaggg ttagtgaaag
1261 tccaggggat ttctcctcca agtcctacca cacaaaggaa agtctcaagc ctctattcac
1321 cccttctcaa tcctcacaaa atagggggtt gttcaatatt gtcttcaatg ataaaaactt
1381 tgtggttaaa agtttctcct taggactagt gacaaagtta ggcttatact tttttttttt
1441 tttgaggcag agtcttgctc tgttgcccag gctggagtgc agtggcgcga tcttggctca
1501 ctgcaacctc cgcctccagg gttcgggcaa ttctcctgcc ttagcctcct gtagtcctag
1561 ctgctcggga ggctgaggca ggagaatctc tttcttaatt ggccaaatat aagttggtgt
1621 cgtaactcca ggccacagtg agttatgggc aaagcttttt tccttaagca tcaacaaaat
1681 aggataaaag gttccaatag gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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