LOCUS BC008491 3426 bp mRNA linear HTC 27-JAN-2004
DEFINITION Homo sapiens nucleolar protein 8, mRNA (cDNA clone IMAGE:4248937),
with apparent retained intron.
ACCESSION BC008491
VERSION BC008491.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3426)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3426)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: k Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction, Similarity but not identity
to protein
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3426
/db_xref="H-InvDB:HIT000087089"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4248937"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
BASE COUNT 1195 a 646 c 812 g 773 t
ORIGIN
1 aggggctgca gcggcgctgg ctttaggtga acgacgtgaa aattactttt cccactgaaa
61 cacacccaag tatatgccca gccttcatga aagtgaacag agaaacgaag cgcctttatg
121 tgggtggcct tagccaggac atttctgagg cagacctaca aaatcagttc agcagatttg
181 gagaagtttc ggatgtggag atcatcacac ggaaagatga ccaaggaaac ccacagaaag
241 tttttgcata tatcaacatc agtgtagcag aagcggacct gaaaaaatcc atttttcacg
301 ttatccagag ggacagcagt gatgaagaga attccagtat cgtataactc agcaggttta
361 ggtccattcc atttggcatc agcagacatg gtagcacttt actggtatgt ctgttttaaa
421 taaaacaaaa tggaaaggtg gaacattaca aattcaacta gcaaaagaaa gctttctgca
481 cagcagttgc cagcctactg tgtacaggca ctagagcccc atgctgagca ggttgagcac
541 acagtgctgc tgcttggagt atctgcgtgg atatgcctga gaagcatggg tctgatggtt
601 attctgggac ataaaggaga cagaccagag gcaaagaggc cagtgaggac tgctctgtgc
661 agttgtccag gcctgaagaa ggtggcggtg atttgaatca gaagaggtgg cattctcttc
721 attaggagga tatggataat caagacctaa caaattgggc tccgaaagat accttcgtca
781 tggggaagag tgaatggaga gaagataata taaaatgcca aacgtatata aattgaaagg
841 ggaaaattga gagaacttgc gatccatggt cttggtcttc cataaagggg aactgggaca
901 tccactggag cagagcacag attggcccaa gagagagaag cagcaaaagc taagaaagaa
961 gaatcaacaa caggtaacgc caacttgtta gaaaagacag gaggagtgga tttccatatg
1021 aaagctgtgc cagggacaga agtgccaggg cataagaatt gggttgtgag caaatttgga
1081 agagtcttac ctgttcttca ccttaaaaat caacataaac gtaaaatcat caaatatgat
1141 ccctcaaaat actgccacaa cctgaagaag ataggggagg atttctcaaa caccattcct
1201 atatccagcc tgacttggga attagaagga gggaatgacc ctatgagtaa gaaacggcga
1261 ggagagttct ctgactttca tggccctccc aagaagataa taaaagtgca gaaggatgag
1321 agttccactg ggtctctggc catgagtaca aggcccagga gggtaataga gagaccaccc
1381 ttaacacagc aacaggctgc acaaaaaaga acttgtgatt ccattactcc ttctaaatca
1441 tctcctgtac ctgtttctga tactcagaaa cttaaaaatc taccttttaa gacttctggc
1501 ttggaaactg ccaagaagag aaacagcatt tctgatgatg atactgattc tgaagatgaa
1561 ttgagaatga tgattgcgaa agaggaaaac ttacagagaa ctacacaacc ctcaataaat
1621 gaatctgaaa gtgatccttt tgaagttgta agggatgatt tcaaatcagg cgttcacaaa
1681 ctgcattctt taataggttt aggtatcaaa aatcgtgtct cttgccatga tagtgatgat
1741 gatattatga gaaatgatcg tgagtatgac tcaggagata cagatgaaat tattgcgatg
1801 aaaaaaaatg ttgctaaggt caaaaacagt acagaatttt cacaaatgga aaaatctacg
1861 aagaaaactt ctttcaaaaa tagagaaaac tgtgagcttt ctgatcactg tattaaacta
1921 caaaaaagaa aaagcaatgt agagtcagcc ctcagtcatg gattaaagtc tcttaatcgt
1981 aaatctccct ctcactccag tagcagtgaa gatgctgatt ctgcatcaga attagctgac
2041 tctgaaggag gtgaggagta taatgccatg atgaaaaact gccttcgtgt gaatctcact
2101 ttagctgatt tggaacaatt ggctggcagt gatctgaagg ttccaaatga agatactaag
2161 agtgatggac cagaaaccac cacccaatgc aagtttgaca gaggctccaa gagccccaag
2221 actcccactg gcctccgcag aggccgacag tgtattcgtc ctgcggagat tgtggcttcc
2281 ctgttagaag gagaggagaa cacctgtggc aaacagaaac caaaggaaaa caatttaaag
2341 ccaaaatttc aggctttcaa gggagtaggc tgtctatatg aaaaggagtc aatgaaaaaa
2401 tccttgaaag acagtgttgc ctctaacaat aaagatcaga attccatgaa acatgaggat
2461 cccagtatca tatccatgga agatgggtcc ccatatgtta atggctcatt aggtgaagtg
2521 actccatgcc aacatgcaaa gaaggcgaat ggcccaaact atattcagcc tcaaaaaaga
2581 cagaccactt ttgaaagcca ggatcgcaag gcagtgtccc ctagcagttc tgaaaagaga
2641 agtaagaatc ctatttctag gccattagaa ggtaagaagt ccttaagtct tagtgcaaag
2701 actcacaaca taggctttga caaagacagc tgccatagta ccacaaagac agaagcttca
2761 caggaagagc ggtctgattc aagcggcctc acatctctca agaaatcacc aaaggtctca
2821 tccaaggaca ctcgggaaat caaaactgat ttctcacttt ctattagtaa ttcgtcagat
2881 gtgagtgcta aagataagca tgctgaagac aatgagaagc gtttggcagc cttggaagcg
2941 aggcaaaaag caaaagaagt gcagaagaag ctggtgcata atgctctggc aaatttggat
3001 ggtcatccag aggataagcc aacgcacatc atcttcggtt ctgacagtga atgtgaaaca
3061 gaggagacat cgactcagga gcagagccat ccaggagagg aatgggtgaa agagtctatg
3121 ggtaaaacat cagggaagct gtttgatagc agtgatgatg acgaatctga ttctgaagat
3181 gacagtaata ggttcaaaat taaacctcag tttgagggca gagctggaca gaagctcatg
3241 gatttacagt cgcactttgg caccgatgac agattccgca tggactctcg atttctagaa
3301 actgacagtg aagaggaaca ggaagaggta aatgaaaaga aaactgctga ggaagaagag
3361 cttgctgaag aaaaaaagaa agccctgaat gttgtacaaa aaaaaaaaaa aaaaaaaaaa
3421 aaaaaa
//